Caenorhabditis elegans (nematode): CELE_R09B3.1
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Entry
CELE_R09B3.1 CDS
T00019
Symbol
exo-3
Name
(RefSeq) exodeoxyribonuclease III
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CELE_R09B3.1 (exo-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_R09B3.1 (exo-3)
Enzymes [BR:
cel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CELE_R09B3.1 (exo-3)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CELE_R09B3.1 (exo-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
173069
NCBI-ProteinID:
NP_001021584
WormBase:
WBGene00001372
Ensembl:
WBGene00001372
UniProt:
G5EBR7
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Position
I:complement(11907571..11909251)
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AA seq
288 aa
AA seq
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MSKRKAEEAPAPKLASIFTKKVKPAEEDNNQKSWKFVCWNVAGLRACVKKSDFKEVLAEE
PDLVFLGETKCKEWPPEMEETFKNYTKTLVVSTEKNGGYAGVGLLSKCAPMKVHKGIGDP
EFDTAGRLIIAEFSKFYFIGAYVPNSGAKLVNLEKRGRWEKLLTEKMKEMDEKKPVIYGG
DLNVAHNEIDLKNPESNRNKTAGFTDQERGWFSEMLELGFTDTFRAMHPDEKKYSFWSYL
ANSRQKDVGWRLDYYVVSNRIMNKVKRSDIMSSVMGSDHAPVVMQIDF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgaaaagcagaagaagcaccagcaccaaagctcgcctcgatcttcacaaag
aaggtgaagccggcagaagaggacaataatcagaaaagctggaagtttgtgtgctggaac
gtggcagggctcagagcttgtgtgaagaaaagtgattttaaggaagtgctcgccgaggag
cctgacctcgtttttctaggagagaccaagtgtaaggagtggcccccggagatggaggag
acgtttaagaactacaccaaaaccctcgtcgtctccacagagaagaacggtggctacgca
ggagtcgggctgctcagcaaatgtgctccgatgaaggttcacaaaggaatcggtgaccca
gaattcgacactgccggacgtctgatcatcgccgagttctccaagttttactttatcgga
gcttacgttccaaattcgggcgcgaagctggtgaatttggagaaacgaggacgctgggag
aagctgctgaccgagaagatgaaggagatggacgagaagaagccagtgatctacgggggt
gatttgaatgttgcacataatgaaattgatctgaaaaatccagaatcaaatcgaaataaa
accgcgggattcacagatcaagaacgtggatggttcagtgagatgctcgagttgggattc
accgacaccttcagagccatgcatcccgacgagaagaagtactcattttggagttatctg
gcgaattctcggcagaaagatgttggatggagattggattattatgttgtcagcaatcga
attatgaataaggtcaaacgcagtgatatcatgagctcggtgatgggaagcgaccatgct
ccggtcgtcatgcaaatcgacttctaa
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