KEGG   Caenorhabditis elegans (nematode): CELE_R09B3.1
Entry
CELE_R09B3.1      CDS       T00019                                 
Symbol
exo-3
Name
(RefSeq) exodeoxyribonuclease III
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CELE_R09B3.1 (exo-3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cel03400]
    CELE_R09B3.1 (exo-3)
Enzymes [BR:cel01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     CELE_R09B3.1 (exo-3)
DNA repair and recombination proteins [BR:cel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     CELE_R09B3.1 (exo-3)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-GeneID: 173069
NCBI-ProteinID: NP_001021584
WormBase: WBGene00001372
Ensembl: WBGene00001372
UniProt: G5EBR7
LinkDB
Position
I:complement(11907571..11909251)
AA seq 288 aa
MSKRKAEEAPAPKLASIFTKKVKPAEEDNNQKSWKFVCWNVAGLRACVKKSDFKEVLAEE
PDLVFLGETKCKEWPPEMEETFKNYTKTLVVSTEKNGGYAGVGLLSKCAPMKVHKGIGDP
EFDTAGRLIIAEFSKFYFIGAYVPNSGAKLVNLEKRGRWEKLLTEKMKEMDEKKPVIYGG
DLNVAHNEIDLKNPESNRNKTAGFTDQERGWFSEMLELGFTDTFRAMHPDEKKYSFWSYL
ANSRQKDVGWRLDYYVVSNRIMNKVKRSDIMSSVMGSDHAPVVMQIDF
NT seq 867 nt   +upstreamnt  +downstreamnt
atgtcgaagcgaaaagcagaagaagcaccagcaccaaagctcgcctcgatcttcacaaag
aaggtgaagccggcagaagaggacaataatcagaaaagctggaagtttgtgtgctggaac
gtggcagggctcagagcttgtgtgaagaaaagtgattttaaggaagtgctcgccgaggag
cctgacctcgtttttctaggagagaccaagtgtaaggagtggcccccggagatggaggag
acgtttaagaactacaccaaaaccctcgtcgtctccacagagaagaacggtggctacgca
ggagtcgggctgctcagcaaatgtgctccgatgaaggttcacaaaggaatcggtgaccca
gaattcgacactgccggacgtctgatcatcgccgagttctccaagttttactttatcgga
gcttacgttccaaattcgggcgcgaagctggtgaatttggagaaacgaggacgctgggag
aagctgctgaccgagaagatgaaggagatggacgagaagaagccagtgatctacgggggt
gatttgaatgttgcacataatgaaattgatctgaaaaatccagaatcaaatcgaaataaa
accgcgggattcacagatcaagaacgtggatggttcagtgagatgctcgagttgggattc
accgacaccttcagagccatgcatcccgacgagaagaagtactcattttggagttatctg
gcgaattctcggcagaaagatgttggatggagattggattattatgttgtcagcaatcga
attatgaataaggtcaaacgcagtgatatcatgagctcggtgatgggaagcgaccatgct
ccggtcgtcatgcaaatcgacttctaa

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