Caenorhabditis elegans (nematode): CELE_R09E10.7
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Entry
CELE_R09E10.7 CDS
T00019
Symbol
ebax-1
Name
(RefSeq) SWIM-type domain-containing protein
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cel04121
]
CELE_R09E10.7 (ebax-1)
Ubiquitin system [BR:
cel04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
CELE_R09E10.7 (ebax-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
177915
NCBI-ProteinID:
NP_501888
WormBase:
WBGene00004140
Ensembl:
WBGene00004140
UniProt:
Q21875
LinkDB
All DBs
Position
IV:10286955..10293013
Genome browser
AA seq
1717 aa
AA seq
DB search
MLPNAVGNNVWNGRDDVSFEDSERFEEDSQVSLDESLDGNSQNWRGWTDCQSNCEAIQPG
LSCVVYQHYSASGRFSSASTRTVVPGDPNNPLSQHPMMSRGDDSIGTLLTLSEISARVCA
EKWSFQQLEEMYSHICTSRAEKLAMPPPISTIPEKIFLSFIVHCFPQSTDEIRMYSTLAN
GSSEQYELGKTIYEWGNVRDVSQTGFLLSGNISNSTHPDTRPIQYDDNSSFHVTVKVDRC
RIVECTCECSNRSSWCKHVVALSIYRIYERSNIKFKETIADAINSMSDFDLRRLVQWHIN
EIPRKCIPGFQKLIDQIKDPHSNINNLHGAPDPTDGGHDPVSRYDFPEIESKIRRLLIKY
CVPAPSVHCDIQYLTATHHPTHIEWTTMIKPLRCRDPEGMWNLLQMIREMFARNDENAVA
LLRTVTDECLSNHQVLLWWYITKLVQSGHWAQTSCFKVPNSQMLAQLNCSQLCDEIVILW
KLVALNPRAGKLYRSQLVPYLQDYHRTAVNRLKNMITLAPPIPAEVTQTTDATVLSNHQT
AAILQTITNMDIRYPLSSQNMKFTLNCFPGFYPAIQMCNYLNEKDIRFGVPTDAIFYVDA
PNLSNSYKMVPPHREKVLKKKKKKKKLLKRKVEEDGPSWRRNEYQGVDGIWRVLNEADAG
NNDSTESGQESDVQKTPQRVEIPRKKKVDSVEMDVNEVLAAAFTPLDALDARFLRVEAYG
THGYRADAIQHALQVIEYLIDSLTEQSNDFRNVHGVENEPSTSKQSSSSSSSTVSDDVTV
ADRDEEIARGCKFLATMEKILYITKVLKDNQNLQQIVFDISMRCLTITKYPFFTKNHQIM
FTYLETEFVGILDQIWQTVPMSDTQIRKIRERASEIIESDSGNNGELPPIAMTKFLFLAL
YWTEPPSTSIRPVPAQSVPPTASPALQHNRRLLNSTDSDLALHVSLHIIGCRPYISDRYI
LHWETIRREKSELTSMLLVRYKDSQEKCALVIDRILDPKLHRMYQNHLSNAAYFLERCPT
YQRRFQPGQRPVFPYRDDQAQEPVPESAPNRCLIADYEAQIEAELQRMIDSEMIPRPPAL
ITRSRPSNEDARSSSSSDNSGYTNRNSGSTHSHSTESIDDSQPGPSMSTTDSSATKKSNS
IVRKPRRRTNRSLSFDTGNTVSDAHVYHMNELSKKILFEAGGSLNNVIWGNPVTGGTNRR
LHLCAIAIACYALGMSNRISPNWNTRTYNNISSWVTSQVQEIGPNAIELIREIWMAHFTP
NEIAQISERSAPASDASMKREAAKLALSVLPFAHALTDEEVINALTKCRSDSRDMMIAGL
LAMDTPQFREIGRSRPLFSAMFYWNELNAEEESRQQQQHQYQQQPPPQARLVPNPYQIMT
NNRNIQKQQQNQQQHQLQRPNNAPQPQRLQVPALPPAAYHLYPQAYEIVEPIANLPPGYR
NDISRLHQSHSAPQLGGNPAETNQEEHIPVVVPTANHQYMPPAQLGNALLNAYYYGMRAM
DCMATSPGEERQMYLKFGPNAPYSDELKVLNFIAHKLGGPYLHSFYSNASRSVLSPYILH
QFATDSARYFPHRMFNQNLPGGNVPYPLFPPNMVAVPSPMPSNIRYPNIRFSTPGQITTL
FIANGFQPITGELYERCCEQYLQAIVNKMNSPRVTSDVEYINQLLEFIQRAHEAFKWFPN
GGSQLFDSFVRAFKRQKSFKKDFANDINNFLGQLSPL
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaaatgcagtgggcaacaatgtatggaacggccgcgatgatgtctcatttgag
gattctgagagatttgaggaggactcacaagtttcactagacgaatcacttgatggaaat
agtcagaattggagaggatggacagattgtcaatcaaattgtgaagcaatccaacctgga
ctttcttgtgttgtttaccagcattacagtgcatcaggacggttttcctcagcatcaaca
agaacagtggtacccggggatccaaacaatccattgagtcaacatccaatgatgtcaaga
ggagatgattcaattggaactctgctcacattatcggaaatttctgcaagagtttgtgcg
gaaaaatggtcgtttcagcaacttgaagaaatgtactctcatatatgtacttcgagagca
gagaaacttgcaatgcctccaccaatctccactattcctgagaagatttttctttcattt
atagttcattgtttcccacaatctactgatgaaattcgaatgtatagtactcttgccaac
gggtcatctgagcaatatgaacttggaaaaaccatatatgaatggggaaatgttcgagat
gtctcacaaactggttttctactcagtggtaacatcagtaactcaacgcatccagatacc
cgtccaattcaatatgatgataattcatctttccatgtaacagtgaaagtagacagatgt
cggattgtcgaatgcacctgtgaatgctcgaatcgttctagttggtgcaaacatgtggtg
gcattgtccatctatcgaatttacgaaaggagcaatataaaattcaaggaaaccatagcc
gacgcaatcaattcaatgagtgattttgatcttcgacgacttgttcaatggcatatcaat
gagattccacgcaaatgtattcccgggttccaaaaattaattgatcaaatcaaggatcca
cattcaaatataaacaatctccatggagctcccgacccaacggatggtggacatgatcca
gtctctcgttacgatttcccagaaatcgaaagcaaaattcggagacttctgatcaaatat
tgtgtgccagctccctctgttcattgtgatatacagtatctcaccgcaactcatcatcct
actcatattgagtggacaaccatgattaaacctcttcgatgtcgtgatccagaaggaatg
tggaatttattacaaatgattcgagaaatgtttgcaagaaacgatgaaaacgctgtggca
ctgttgagaactgtgactgatgagtgtctatcaaaccatcaagttcttttatggtggtac
attactaaattggttcagtcagggcattgggctcagacttcttgcttcaaagttccaaat
tcccaaatgctcgcccaactgaattgttctcagctttgcgatgaaattgtcatactctgg
aagttggtggcactcaatccaagagctggaaaattataccgatcacagctagtaccttac
cttcaagactaccatcgaactgcagttaatcgtttgaaaaatatgatcactttggctcca
ccgattcctgcggaagtcactcaaacaactgatgctacagttctaagcaatcaccaaaca
gctgcaatactccagacaatcacaaacatggatattagataccctctgtcatctcagaat
atgaagttcactctgaattgcttccctgggttctatccagcaattcaaatgtgtaactat
ctaaatgaaaaagatattcgatttggtgttcccactgatgcgatattctatgttgatgcg
ccaaatctatcgaacagttacaagatggttccacctcacagagaaaaagtgttgaaaaaa
aagaaaaagaagaagaagcttctcaaaaggaaggttgaagaagacggaccatcgtggcgc
cgtaatgagtatcagggtgttgatggaatttggagagttctcaatgaagcagatgctgga
aataatgatagtacagagagtggacaagaaagtgatgtacagaagacacctcaaagagtt
gaaataccacgaaaaaagaaggtggattcagttgaaatggatgtaaatgaagtgttggct
gctgcgttcacaccgcttgatgctttggatgcgagatttttgcgagttgaagcctatgga
actcatggttatcgagccgatgctatacagcatgccctccaagttattgaataccttatt
gacagtttgactgaacaaagcaacgattttcgtaatgtgcacggtgttgaaaatgagcca
agtacttcaaagcagtcttcatcttcatcatcatctaccgtatctgatgacgttactgta
gccgatagagacgaagaaatcgcgagagggtgcaagtttttagcaacaatggaaaagata
ttatacattacaaaagttttgaaggacaatcagaatctgcagcaaatcgtatttgatatt
tcaatgagatgcttgacgattaccaaatatccatttttcacaaaaaatcatcaaattatg
tttacatatttggagacggaatttgttggcattttggatcaaatctggcaaactgtcccg
atgagtgatacccagatacgaaaaattcgagaacgtgcgtcggaaattatcgaatcagat
tctggaaataatggagaacttcctccaattgcaatgactaaatttttattcctcgcacta
tactggaccgaaccaccgagcacatctatccgacctgtccctgctcaaagtgttcctcca
actgcttcacctgctcttcaacacaatcgaagacttctcaattctacagattcagacttg
gctctacatgtttctctccatataatcggatgtcgaccgtacatttctgatagatatatt
ctacattgggagactattcgccgagaaaaaagtgaattgacatcaatgctccttgttcgc
tacaaagattcgcaggaaaaatgtgctctcgttatcgaccggattttagatcctaagctt
catcggatgtaccaaaatcatctatccaatgcagcatattttcttgaaagatgccccact
tatcaaagacgattccaaccaggacagagaccggtgtttccgtacagagatgatcaagca
caggagcctgttcccgaatctgctccaaatagatgcttgattgcagactatgaagctcaa
attgaagctgagcttcaaagaatgattgattcagaaatgatacctagacctcctgcgtta
ataaccagatcaagaccatcaaacgaagatgcccgaagttcttcttcgagtgacaattct
ggctacacaaacagaaattcgggatctacgcacagccattcgacagaatcaattgatgat
agtcaacccggtccaagcatgtctaccaccgactcaagtgcaacaaaaaaatcaaattca
attgttagaaagccaagacggcgaacaaatcgttcactttctttcgatacaggaaacacg
gtttcggatgctcacgtttatcacatgaatgaactttcaaagaagattcttttcgaagcg
ggaggttctcttaataatgttatttggggtaatcctgtcactggaggcacgaataggcgg
cttcatctctgtgccattgcaatcgcctgctatgctcttggaatgagcaacagaatctca
cctaattggaatactcgaacctacaataatatatcaagttgggtgacatcacaagttcaa
gagatcggtccaaatgctatcgaactgattagagaaatctggatggctcatttcacgcca
aatgaaattgcacaaatatcagagagatcggctccagcatctgatgcatcgatgaaaaga
gaagcggctaagttagcattgtctgtgctcccctttgcacatgcacttaccgatgaagaa
gtcataaatgcgttgacaaaatgccgaagtgatagtcgtgacatgatgattgctggttta
ctggcaatggatactccccaatttcgagaaattggacgatcgagacctttattttccgca
atgttttattggaatgagttgaatgcggaagaagagtcaagacaacagcaacaacatcaa
tatcaacagcaaccacctcctcaagctcgattagtaccaaatccttatcaaattatgacg
aataatcggaacatccaaaagcaacaacaaaatcagcagcagcaccaactccaaagaccc
aataatgcacctcagccacagcgactgcaagtacctgctctgcctccagccgcctaccat
ctttaccctcaagcgtacgagattgttgagccaatcgcaaatttacctccaggctacaga
aatgatatttcccgacttcatcaaagtcattcagcacctcaacttggaggtaatccagca
gaaacgaaccaggaagagcacatccctgttgtcgttccaactgcaaatcatcagtatatg
cccccagctcaacttggaaatgctcttctgaatgcttattactatggaatgcgagcaatg
gattgtatggcaacgtcgccaggcgaagaaagacaaatgtatctcaaatttggacctaat
gctccatactcggatgagttgaaagttttaaatttcatcgcacataaacttggtggtcct
tatcttcacagcttctattcaaatgcgtcacgatcagttctttcgccctatattcttcat
cagtttgcgacagatagtgctagatatttccctcataggatgtttaatcaaaacctcccg
ggaggaaatgtaccgtatccactctttccaccaaacatggtcgctgttccatcaccaatg
ccctcaaatattcggtatccgaatatcagattctcgacacctggacagattacaactcta
ttcatagcgaatgggttccagccgattactggtgaactctatgaaagatgttgtgagcag
tacttacaggcaatcgtgaacaagatgaatagtccacgtgtcacttctgatgttgagtat
atcaatcaattgctggaattcattcaacgcgcccacgaggccttcaaatggttcccaaat
ggtggatcacagttgtttgattcatttgttcgagcattcaaacgccaaaaatcgttcaag
aaagattttgcaaatgatataaataatttccttgggcaactcagcccattatag
DBGET
integrated database retrieval system
