Caenorhabditis elegans (nematode): CELE_R09H10.4
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Entry
CELE_R09H10.4 CDS
T00019
Symbol
ptr-14
Name
(RefSeq) SSD domain-containing protein
Organism
cel
Caenorhabditis elegans (nematode)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-GeneID:
177951
NCBI-ProteinID:
NP_501963
WormBase:
WBGene00004228
Ensembl:
WBGene00004228
UniProt:
Q21883
LinkDB
All DBs
Position
IV:10615427..10620964
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AA seq
877 aa
AA seq
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MTGASALDPPAFVRLLNRLFRQCGLFVADNDKAVLIVTLLLTAFCSSKICFTKQEDDIKT
GYTPVGARSLDEIEVFSDFFASTGDPIAVFLFITAKDNSSMADYNTMKEVVDIMDYVGSN
LTHKGESFYTLCTDFCQINEPVRQYYNGLAMKQQNLSEVGSRFQLTFPMMQVLGKELDLS
PNFFGVKTDEDGNVEYVKIIMLQIRANIPNDWKKEDAAEYERMISQYFHFKYDSTHVTPL
AMSLTYTGDEVVRTGLTIFPFIGVGFIIMTTFSIITIYYSSSRLDQWSVHKVSEAILACV
CPLLATSSALGTLFWFGFRFGTILCVTPFLILAIGVDDAYLQVHACMRLTAEDSSMTKRE
KIARMLVEVGPSIAITSMTNLFAFLVGIYTPTPEISLFCAGNAVAILFDFIYQITMYTAI
LSICENLEMRKNATKRKDSGLSFKNEQFTVMLDSYCDWVANAYTHLLVLFCFIVYIFVSI
RGALNINIILSPDKLVIGDSPLLQVNYLRDQFVLPNYTTVNIFVQNPGNLTIQSNLDYMN
SLFDSFESYPECLGKKFSHYFVRDYESFRESSLEEMEMMEDEEGDTNKTALEPFSKAAMS
EFLAWPEFQHWNGFVKFDKNGMLSKYWATVSYHGEGLGDFQVRRRMLNRWRATADQFAPL
NVSIFDDYAPFVDTLETILPATISTSVCTLICMMIVCFLFMYNVFTVFVATLAITSICIG
VFGFLSMWGIDLDPISMACLIMSIGFSVDFPAHITFHYFREGLHDPQSTPAKRVARSLAA
IGFPLLQCGLSTILFVLCLLFVPTYMGEVFVKTMILVVTLGLIHGLFIVPAFLCAFTAIH
QTCFSSSRVAHSQSFSSLAKLFSWRISPSTSDNKISA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgactggtgcatcggctctagatccaccggctttcgtgcgtcttctgaatcgcttattc
cggcaatgtggattatttgtggccgacaacgacaaagctgtcctcattgtgaccttactt
ctcaccgccttctgttcatcgaaaatatgtttcacgaaacaggaggacgacatcaagaca
ggatacactcctgtcggagcccggtcacttgatgaaatcgaagtgttctctgatttcttt
gcttccacgggagatccaattgcagttttcctgttcataactgcaaaggataactcatca
atggctgattataatactatgaaagaagttgtcgatattatggattatgttggaagtaac
ttgactcataaaggagagtctttctatacattgtgcactgatttctgccaaattaatgaa
cccgttaggcagtactataatggtcttgcaatgaagcaacaaaacctatctgaagttgga
tctcgtttccaactaaccttcccaatgatgcaagttcttggtaaagagcttgatctgagc
ccaaatttctttggtgtcaaaactgatgaagatggaaatgtcgaatatgtaaagattatt
atgcttcaaataagagcaaatattccaaatgactggaaaaaagaagatgctgcagaatat
gagcgtatgatttctcaatatttccattttaaatacgattcaacgcatgttactccactt
gcaatgagtttaacttacaccggagatgaagttgttcgtactggccttaccatctttcca
tttattggtgttggatttatcattatgactactttctcgattatcactatctactatagt
agctctcgtcttgatcaatggagtgttcataaagtatctgaagcaattcttgcgtgtgtc
tgcccacttcttgccacttcatctgctcttggaactcttttctggtttggtttcagattt
ggaactattctttgtgtaacaccgtttttgattttggccattggtgttgatgatgcttat
cttcaagttcatgcttgcatgcgtttgacagcggaagatagttcaatgacgaagagagaa
aaaattgctcgaatgcttgtcgaggttggaccatcaattgcaattacctcgatgactaat
ctctttgctttcctcgtcggaatctacactccaacacctgaaatttctcttttctgtgct
ggaaatgctgttgctatccttttcgatttcatctatcaaatcacaatgtacactgccatc
ctctccatttgtgagaacctggaaatgagaaagaatgccacgaagcgaaaggattctgga
ttgagcttcaaaaatgagcagttcaccgtaatgttggatagctattgtgattgggttgcc
aatgcctacacacatttgcttgttcttttctgcttcattgtctatatttttgtttccatt
cgtggagcattgaatattaatatcatcttatcaccagataaattggtgataggagattct
ccattgcttcaagtcaactatttgagagatcaatttgttcttccaaattatacaaccgtt
aatatatttgtgcaaaatccaggaaatctgacaatacaatccaacctcgattacatgaat
tctcttttcgacagtttcgaatcctacccagaatgtcttggaaagaaattcagtcactat
tttgtcagagattatgaatcattccgtgaatcgtctctggaagaaatggaaatgatggaa
gacgaagaaggagataccaataaaacagctcttgagccattctccaaagctgcaatgtca
gaatttcttgcatggccagagttccaacattggaatggatttgtgaagtttgacaagaat
ggaatgctctcaaagtactgggcaactgtatcttatcatggagaaggacttggagatttt
caagtgagaagaagaatgttgaataggtggagagctacagccgatcagtttgctcctttg
aatgtttcaatttttgatgattatgctccatttgttgatacacttgaaacaattcttccg
gcaacaatctcgacatctgtttgcactctcatatgtatgatgatcgtctgtttcttgttc
atgtacaacgtcttcaccgtttttgtagcgaccttggccatcacctctatttgcataggt
gtgttcggatttctatcaatgtggggaatcgatttggatccaatatcgatggcttgctta
atcatgagtattggattttcggtggatttccctgctcatattacattccattattttaga
gaaggacttcatgatccacaatcaacaccagcaaagagagttgcaagatccctcgccgct
ataggatttccacttttacaatgtggtttatcaacgattctattcgttctttgcttactt
tttgttccaacctatatgggcgaagttttcgtgaagacaatgatccttgtggtgacactg
ggtctcatccatgggctttttattgttcctgcattcctatgtgctttcacagcgatacat
caaacttgcttctcatcttcaagagttgctcattcacagtcattttcgtcgcttgccaaa
ctgttttcatggaggatttccccatcaacaagtgacaacaaaatctcagcataa
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