Caenorhabditis elegans (nematode): CELE_R31.3
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Entry
CELE_R31.3 CDS
T00019
Symbol
osm-6
Name
(RefSeq) Intraflagellar transport protein 52 C-terminal domain-containing protein
KO
K19681
intraflagellar transport protein 52
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cel03037
]
CELE_R31.3 (osm-6)
Cilium and associated proteins [BR:
cel03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
CELE_R31.3 (osm-6)
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Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
Motif
Other DBs
NCBI-GeneID:
179631
NCBI-ProteinID:
NP_741633
WormBase:
WBGene00003886
Ensembl:
WBGene00003886
UniProt:
G5EDF6
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Position
V:complement(11924621..11927446)
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AA seq
472 aa
AA seq
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MPPFSDEKMTNRSIGRKVLIDQSKQQQISLISGFRGVARHLKSVLTVEINTEPINLNGLE
DVRMLIIPQPKTSFGTGEIEAIWKFVEEGGSLMILSGEGGERQSLNEMIAKYGITVNKDS
VIRTVFLKYFDPKEALVANGVINRAIAVAAKKNVSTEQKHNSQALSFIYPYGCTLDVNNR
MSNVVLSSGSTSFPTSRPVAAFHETKLNEMKKKGRVCVVGSVSMFHDTYIDKEENGKIFD
TFVEFLVNGLELNTIDAAEPEINDYTNIPDHIHMSQQIKVCMYEGELDQAISSDFMKIMD
TSLHSFNLKHWPMTIRLYEALNLSPPPLTLVEPQFELPMPPFQPAVFPPTFQELPMPPLE
LFDLDEQFSSPEIQLSQLANRSEEEDLIFFIEKAGEITGISAELTRSERTPKKIIELAVS
KLMLFKRSMMDGELEVASAFDIGEHDAHHQSFNQGEEMDEQLFSDIDEFDDL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcctccattttcagacgaaaagatgactaaccggagtattgggagaaaagttctgatt
gatcaatcaaaacagcaacaaattagtttgattagtggttttcgtggtgtggcaagacat
ttaaaaagtgttcttactgttgaaataaacacagaaccaattaacttaaatggattagaa
gatgttcggatgcttatcattccacaaccaaagacatcatttggaactggagagattgaa
gcaatatggaagtttgtggaagaaggtggttcattgatgatcctttctggtgaaggtggt
gagagacaatcattaaatgaaatgattgcaaaatatggaattactgtgaataaggattcg
gtaattcgtactgtattcctgaaatattttgatccgaaagaagctttagtagcaaatgga
gtcataaatcgagcaattgcagtggctgcaaaaaagaatgtgagcactgagcaaaaacat
aattcacaagcactttcattcatttatccatatggatgtactctagatgtgaataatcgt
atgtcgaatgtagtattgtcttctggaagtacaagttttccaacaagtcgcccagttgcc
gcttttcatgagacaaaactcaatgaaatgaaaaagaaaggtagagtgtgtgtggttgga
tcagtctcgatgtttcatgacacatacatcgataaggaagaaaatggaaagatttttgat
acatttgtggaattcctggtcaatggtcttgaactgaacacgatagatgctgcagagccg
gaaattaatgattacacaaatattccagatcatattcatatgtcccagcagatcaaggtt
tgtatgtacgaaggagaattggatcaggcaatcagttcggatttcatgaagattatggat
acttcgttgcattcttttaatttgaaacattggccaatgactataagattgtatgaagca
ttgaatctttcacctccaccacttacccttgttgaacctcaatttgaacttccaatgcct
ccatttcaacctgcagtatttccaccaacatttcaagaattaccaatgcctcctcttgaa
ttatttgatcttgatgaacagttcagctctccggaaattcaactttctcagctcgcaaat
agaagcgaggaagaagatctcatattctttattgaaaaagctggtgaaattactggaata
tctgctgaattgacaagaagtgaacgaacccccaagaaaataattgagttggcagtgagc
aaactcatgttattcaaacgttcaatgatggatggagagttggaagttgcatcagcgttc
gatattggagagcatgatgctcatcatcaaagttttaatcaaggcgaagagatggacgag
cagctgttctctgatattgatgagttcgatgatttgtga
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