Caenorhabditis elegans (nematode): CELE_SSSD1.1
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Entry
CELE_SSSD1.1 CDS
T00019
Symbol
igcm-2
Name
(RefSeq) B-cell receptor CD22-like
KO
K22656
immunoglobulin superfamily member 9B
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cel04515
]
CELE_SSSD1.1 (igcm-2)
Cell adhesion molecules [BR:
cel04515
]
Immunoglobulin superfamily
IGSF9
CELE_SSSD1.1 (igcm-2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
Ig_5
Ig_4
fn3
Ig_C17orf99
BiPBP_C
PKD_3
C2-set_2
Motif
Other DBs
NCBI-GeneID:
180913
NCBI-ProteinID:
NP_001362087
WormBase:
WBGene00020130
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All DBs
Position
X:complement(6379372..>6391591)
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AA seq
802 aa
AA seq
DB search
MSSSRYAAKFIRRQTDDGEMKAYWGKAGAPITLPCSISLFNEESFSLDWRKDGQLILSAF
GQEQGHVTPTLQGRLARDGFLGITIHSVTDGDAGVYQCIVTKFSKQPTRPEKGLSAKLVV
NVPPVIISPSKNAIIHKKVGADLIFECKAEGAPSPEITWSRNEQIISTSPVLTLSNLEEG
DKGLYTCLAVNIEGNSTSSIDVRFTKATILDLIPLNKTVIEGSNVFWHCHANAQATAISY
SWLFEKKPIKTTSLGLRSNIRSGDLSLQDVRKSDSGWYTCEAKNSAGETTSSTAYLHVFY
PPEPLSSHQPVQTVASGRNTTVSCDVIANPTPTSYTWSKNGHYLPTQASSHIIISYAKPG
DGGIYGCQADNIAGKGSIVETHLIVAEPPVFTVAPPSEIKVRLGDQVSIPCQGFGDPMPI
VYWIRDKKRINQSTLTFKKVEHLDHGAYECVVANSVETISTRVMLLVEITKPQMASSIKF
TCLNSSSMRISWTPGYNGGFDQTFAVHAQNDVTLQWTSIKTSLNETILDHLEPFVSYRVS
IESVNAKGSTNSTTYNRRSCTSLHAPDKLYFCGYNELCWTAAEGASSYRIESRTEPSKNF
QPLAEVLETYYRLGKDVDETKQTIFRVRSTRPSYPPSEPSNALRYGIADNVDLPIFMLAA
VFGLLFCFACGLFAWRCFHNKNKKSKRRKSRSNSTPSKTYQDYGRFTYGDGSSSSQPGTE
TYYEPSLRLLDDHEWRGPRDLEPVAVRYPPSLAELDYDIGEDHPIDDMFRDRYILGVQDP
PAQLYQDLRLERLRREYKQSQI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcccggtatgctgcaaaatttataagaagacagacggatgatggggagatg
aaagcatattggggtaaagctggagcaccaattactctgccctgctctattagcttgttc
aacgaggaaagtttttcgctggattggagaaaagatggacaactaattctcagtgctttt
ggtcaggaacaaggacatgtgacaccgacattgcaaggtcgtctagctcgagatggattt
ctagggataacgatacattcggtcacggatggggatgcaggagtataccagtgtattgtc
acaaagttctcaaagcaacccactagacccgagaaagggctttcggcaaagttagtagtg
aatgttccgcctgttattatatccccatccaaaaatgctataattcataagaaagttgga
gctgatttaatatttgaatgtaaggcggagggtgctccatctccagaaattacttggtca
aggaacgagcagatcattagcacctcacctgttctaacgcttagtaatttggaagagggt
gataaagggttatacacatgtctagctgtgaacattgagggaaacagtacatcatcaatt
gatgtaaggtttacgaaagcaacgattcttgatttgatacctttaaacaaaaccgtcatc
gaggggtccaatgttttttggcactgtcacgcaaatgcccaagctaccgctatatcgtat
tcctggctcttcgagaaaaagccaattaaaactacttcgttaggactccgctcaaacatt
cgatccggcgatctttcacttcaagatgtcagaaagagtgacagcggttggtacacttgc
gaagccaagaatagtgccggagaaacgacaagttcaactgcttatcttcacgttttctat
ccaccagaaccattatcatctcatcagccggtacaaactgttgcttccggaagaaataca
actgtatcttgtgatgttatcgcaaatcctactccaactagctacacttggtcaaaaaat
ggtcattacttaccgacacaagcttcaagtcatattattatcagctatgcgaaaccaggt
gatggtggtatttacggctgccaggccgataatattgctgggaaaggatcaattgtagag
acgcacttgattgttgcagagcctcccgtattcacagttgcacccccatccgagataaaa
gtacgcctaggcgatcaagtttcgattccctgtcaaggctttggagacccaatgcctatt
gtttattggataagagataaaaaacgaataaaccaatcgacgttaacattcaaaaaagtt
gaacacttggatcacggtgcttatgagtgcgttgtcgccaattccgtcgagaccatctca
acaagagttatgttgctggttgagataacaaaacctcagatggcttcatctatcaagttt
acatgtcttaatagcagttcgatgagaatttcttggactccaggatacaatgggggtttt
gatcagacttttgccgtacatgctcagaatgatgttacactgcaatggacatctattaag
acatcactgaatgaaacaattttggatcatttagaaccatttgtgtcctatcgtgtgagt
atcgaaagtgtgaatgcaaaaggatcgacaaattccacaacttataacagaaggagttgc
acaagtctccatgctccagacaaattgtacttctgcggctacaacgagttatgttggacc
gcagctgaaggagcatcatcatatagaattgagagtcgaacggaacctagcaaaaacttc
cagccattggccgaagtgttagaaacgtattatagacttgggaaagatgtcgacgagacc
aagcagaccatcttccgtgtccggagcacaagaccatcatatccacctagtgaacccagt
aatgccttaagatacggaatagcagacaatgtggacctccctattttcatgcttgccgca
gttttcggtcttctgttctgctttgcttgcggtttatttgcctggagatgtttccacaac
aagaataaaaaatcaaagcgaagaaaaagcagaagcaattcgacgccctcaaaaacgtat
caggactatggaagatttacttatggagatggaagcagctccagtcaacccggcactgaa
acgtactatgagccttcactgagattattggacgaccatgaatggagaggaccgcgtgat
ttagagcccgtggctgttagatatccaccgtctcttgccgagttagactatgatatcgga
gaagaccacccaatagatgacatgttcagagatcgatacattttgggagttcaagatcca
ccggctcagctgtaccaagatttgcgactggaaagactgagacgagaatacaagcagtct
caaatctaa
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