Caenorhabditis elegans (nematode): CELE_T01D1.2
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Entry
CELE_T01D1.2 CDS
T00019
Symbol
etr-1
Name
(RefSeq) RRM domain-containing protein
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_T01D1.2 (etr-1)
Spliceosome [BR:
cel03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CELE_T01D1.2 (etr-1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
173401
NCBI-ProteinID:
NP_001367867
WormBase:
WBGene00001340
Ensembl:
WBGene00001340
UniProt:
G5EF03
LinkDB
All DBs
Position
II:<162423..>170631
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AA seq
584 aa
AA seq
DB search
MSGAVLPAVLVVPKMESVVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVG
QIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIK
VIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK
SRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSMITGSGAG
SPKGGAASLLQNLNPALLQQLGGGQNYQAVASLLSLINGQQGQQQQHQQQQNVLGILGTV
LSALGKLTEGGDDASAKSSSEKPRHQALMTSPAPTATSSTSSSASHHHQQHQQQLSQQQQ
QQQHPQQQGLGNPLLGNPAMAAQNQFDAITMAQIAHQQQMLALQGFAVQQGAPSQQQQGL
AGGMAGAKTTSPVAASLANHQQIALTPFAGGAAALDHFQAMQQYALLANLQATGGVGVQA
TTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSK
CFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagctgtgctaccagcagttctagtggtaccaaaaatggagtcagtagtcgtt
ccgattgcggagtccaccgtcattaatgccaaggacacaacaccatccacggcagcggac
aacgacgtgtcaccgtccccatcggagccagacacagatgcgatcaagatgttcgtcggc
cagatccctcgccagtggaacgagacagactgtcggcgattattcgagaagtacggatca
gtgttctcgtgtaacatactccgtgacaaatcgacacaagctagcaaaggctgctgcttt
gtcacattttatcacagaaaagacgcgatagaggctcaaggagcccttcacaatataaag
gttattgaaggaatgcatcatccggtacaaatgaaaccagctgatactgagaaccgaaat
gaacgaaaacttttcatcggccagctcagcaagaagcacaacgaggagaatctgcgtgag
atttttgccaaattcggccatattgaagattgtagtgtgcttcgtgatcaggacggaaaa
agtcgaggatgtgcatttgtaacgttcacaaaccgcagctgtgccgtcgtcgccaccaaa
gaaatgcatcactcgcaaacgatggagggatgctcagcgccgcttgttgtaaagttcgct
gacactcaaaaagacaaagacgtgaagacgaaatcaatgatcactggaagtggagccggt
tcaccgaaaggaggcgcggcaagcttgcttcaaaacttgaatccggcgctgttgcagcag
ctcggcggtggacaaaactatcaagcagtagcctcacttttgtctcttatcaacggacaa
cagggacaacaacagcagcaccaacagcaacaaaatgttttaggaattttgggaacagtg
ctctctgcgctcggcaagctaaccgaaggcggtgacgacgcgtcggcaaagtcctcatcg
gaaaagccacgccaccaagcgttgatgacgtcaccggcaccgactgccacgtcatcaacc
tcatcgtcggcttcacatcatcaccagcagcatcagcagcagttatcacagcaacaacaa
caacaacaacatccgcagcaacaaggtttaggtaacccattgcttggaaatccagctatg
gctgctcaaaatcaattcgacgctatcacaatggcacagattgctcatcaacagcaaatg
ctggcactccaagggttcgccgtgcaacagggcgctccaagccaacagcaacaaggactt
gccggtggaatggctggtgcaaagactacatcaccagtcgctgcatcgctcgccaatcat
caacagattgcgttgaccccatttgcaggaggagccgccgctttggatcatttccaggct
atgcagcaatatgcactccttgcaaatcttcaagcaaccggcggcgttggcgtgcaggcc
acaacctcagcagctcaaatggttggaaacggtgacgtaaagggtccagacggtgcgaat
ctcttcatatatcacttaccacaagattttggagacagtgacttgataaatacgtttgcg
ccgtttggtggaatactgtcggcgaaggttttcatcgataaagtcacgaatttgtcgaaa
tgctttggtttcgtctcgtatgagaacgctcagtcagctacaaacgcaatttctgcaatg
aacggcttccaaattggttcgaaacgactgaaagtacagttgaaagtggatcgtggaaat
ccttacaatcgataa
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integrated database retrieval system
