Caenorhabditis elegans (nematode): CELE_T04H1.4 Help Entry CELE_T04H1.4      CDS       T00019                                  Symbol rad-50 Name (RefSeq) DNA repair protein rad-50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism cel  Caenorhabditis elegans (nematode) Pathway cel03440   Homologous recombination cel03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:cel00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     CELE_T04H1.4 (rad-50)    03450 Non-homologous end-joining     CELE_T04H1.4 (rad-50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cel03032]     CELE_T04H1.4 (rad-50)    03400 DNA repair and recombination proteins [BR:cel03400]     CELE_T04H1.4 (rad-50) DNA replication proteins [BR:cel03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     CELE_T04H1.4 (rad-50) DNA repair and recombination proteins [BR:cel03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      CELE_T04H1.4 (rad-50)     BRCA1-C complex      CELE_T04H1.4 (rad-50)    NHEJ (non-homologous end-joining)     MRX complex      CELE_T04H1.4 (rad-50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rad50_zn_hook AAA_23 AAA_15 SbcC_Walker_B SMC_N AAA_21 AAA_29 AAA_16 AAA_13 AAA SRP54 ABC_tran Motif Other DBs NCBI-GeneID:  179678 NCBI-ProteinID:  NP_506070 WormBase:  WBGene00004296 Ensembl:  WBGene00004296 UniProt:  O44199 LinkDB All DBs Position V:<12245646..12251246 Genome browser AA seq 1298 aa AA seqDB search MAKFLRLHIRGIRSVGDEDHDVHKIDFLSPCTLISGPNGTGKTTTIEALNFVTTGQMPTQ KKQNFIHSTDVARKTRVDASVTLEFIDVKGRECTAVRRLVVTSGTKAAALAEEHTLAIKY PDGTVNTLSSKVCDFNTALLKHLGVPRAVFKYVIFCHQEDSTWPLSEPKELKKRFDDIFQ LTKFVKAQERMKKIVLDFKKEMQTHEMSKQLYETHVRDKLVARQNQEECERKISKRKEET DELKERKANGQKKIEEMRTSIHELEDTLTSFKKTELERQNLKKQLSLIRVEPYFGTEEEL KREIEEFRGSEGRSYGEERARIQKKIGKNNQERQELSQKKTEFENRISSLKAEVIHCQSL KYDLERLENQLRSELDLEHDADIDIEIDNAITLKIRGMSDKARMIAKNCAELQSNLRTAQ EAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPL LDENALTECKLKREKYLKQLDILKKKCAEAEKNAEKDREKESLKQTLSIARKKMTAYQRI YDNNWQGLIGQAPDFPWTPILSKTFHKLRNDKKIMEEDLRDVQLNVQKLETMQHQYRKQE ESLTAQELKLSENIFEACSCEAEEVSEKLENLRKRLKKARKDLAPLSAKSNLYDSYIEES KSSGCCPLCDRDFKTKKEINEFSKKLENMTLSFPTEQEELEKLVSKLEKEEIIIVKAEGQ ANELQRIVKELKEVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQ QLYEQTEENEKRYEQLVSESDSSDGLSYTELRKKVEDKDEEYRKIVQEGEELQKCSEERN KLQSKLNELGTHRVSLGEAAAQAGAFAEQLETKIKEIQECITAISQKRNEDLPDAQFKKD DLTRNVSSKEEEKKKAEMEVQMMKKELDQKIFHRKSLFKKVQEGGLCERQLMDKENNIAT LNASLEENQQRQKRFEEDLRSFDSSHQRESILKDQLTRMIIENKIKELKRTLATFDGQIN EDRITEQKQAYNKLQNELRLIGNEEVKIYTQMQEYEKQKKIAEAKLSTKECQNAESNYRD AIIELAITKESISDLTKYRNCLDASLIQFHSEKMGRVNGIIDDLWRKVYNSTDITTIRIR SDATSETSSKKVAYEYNVMMVHETGTEVEMRGRCSAGQKMLASLLIRIALAEVFGGSCSM IALDEPTTNLDESKVEGMAIVLADIIAERRGFDENGKLRGRDMQMVVITHDERLVNRITI SCRPEYIYCLGKDEHGISFLSKRYPDGTVKRVNTKRRF NT seq 3897 nt NT seq  +upstreamnt  +downstreamnt atggcgaaatttttacgcctacacatcagaggaattcgaagtgtcggtgatgaggaccac gatgttcacaaaattgatttcctctctccgtgcacactaatcagtggaccaaatggaaca ggaaaaacgaccaccatcgaggcactcaactttgtaaccaccggacaaatgcctacacag aagaaacagaactttattcacagcacagatgtagcacgcaaaactcgtgttgatgcctca gttactctcgaattcattgatgtcaaaggacgagagtgtacagctgtacggagacttgtt gtgacatcaggaacgaaagctgcagcactagcagaagaacacacattagctataaaatat cctgatggcacagtcaatactctgagcagcaaagtttgcgacttcaacactgcactttta aaacatttaggcgtcccgagagcagttttcaaatatgtaattttctgtcatcaagaagat tcgacttggccactcagtgaaccaaaagaactgaaaaaacgttttgatgacatcttccaa ctgacaaaatttgtgaaagcacaggaacgaatgaaaaaaattgtgctggattttaagaaa gaaatgcaaacccacgagatgtctaaacaactctacgagactcatgttagggataaactg gtcgctagacaaaaccaagaagaatgtgagagaaaaatatcgaaacggaaagaggaaact gatgagctgaaagaacgaaaagccaatggacagaagaagatagaagagatgagaacgtct attcacgaactcgaggacacattaacttcgttcaagaaaactgaattggagaggcaaaac ttgaagaaacagctttctctcattcgtgtggagccctattttggaactgaagaagagttg aagagagaaattgaagaattccgtggttctgaaggacgcagctatggtgaagaacgggcc agaatccagaaaaaaattggtaaaaataatcaggaacgacaggagttgtcgcaaaagaaa actgaattcgagaacagaatttcaagtttaaaagctgaagttattcactgccaatcactg aagtatgacctggaacgactagaaaatcaacttcgttccgaactcgatcttgaacacgat gcggatattgacattgaaattgataacgctatcacattgaaaattcgaggaatgtctgat aaagcacgaatgattgcaaagaactgtgccgaacttcaatccaatctgcgaacagcacaa gaagcagctacaaaaattgaagtagaaatgaaaactcttcaaaacgaaaaagtcaaactg gagaaagaagtagaacagctgaaattcaaaatcaaacaaggacagaatgccactgcaggc atgaaggatcttctgaaaaaagaagaagctctgagaaaaagtcttgctgaccttccatta ctcgacgagaatgcactgacagaatgcaaactcaagcgagagaaatacctaaaacaattg gacattctgaaaaagaagtgcgccgaggctgaaaagaatgctgagaaagacagagaaaaa gaatccttgaaacaaactctgtctattgctcgaaaaaagatgactgcatatcaaaggata tatgataacaattggcaaggattgattggacaggctcccgattttccatggactccaatt ctatcgaagactttccacaaattgaggaatgataagaaaatcatggaagaagatcttcga gatgttcaattaaacgtccaaaagcttgaaaccatgcaacatcagtacaggaagcaagag gaaagtctaacagcacaggaattgaagttgagtgaaaacattttcgaagcttgttcgtgt gaagctgaagaagtctccgagaaattggaaaatcttcgaaagcgtctgaagaaagcccga aaagatttagcgcctctcagtgcaaaatcaaatctctacgattcttatatcgaagaaagc aaaagcagtggttgctgtccactttgtgatcgtgacttcaagacaaagaaagaaataaat gaattctcaaagaagcttgaaaatatgacacttagttttcccactgaacaggaagaattg gagaaattagtttcgaaattggaaaaagaagaaataattattgtgaaagcagaaggacaa gcaaacgaactgcagagaatagtaaaagaactaaaggaagttcgagagaaaaacagaaag ctgtctactgaaatggcggaagagaaatcgaatctttctaaaaacgaaaaacaactggaa accgtgaatgctaaactcaaattagctgaagatttgcaaacagatgttggtgtaattcaa caactctatgaacaaacagaagagaacgaaaagagatatgagcaacttgtttctgaatct gattcttcggatggcctcagctacaccgaacttcggaagaaagttgaagacaaagatgaa gaatatcgtaagattgttcaagaaggagaagaacttcagaagtgttctgaggaaagaaat aaacttcaatcaaaactgaatgagctcggaactcaccgagtttctttgggagaagctgct gcacaggctggtgctttcgcagaacaattggaaactaagataaaagagattcaagagtgt attacggcaatctcgcaaaaaagaaatgaagatcttccggatgctcagttcaagaaagat gatctcacaagaaatgtttccagtaaagaagaagagaagaaaaaagctgaaatggaagtg cagatgatgaaaaaggagttggatcaaaaaattttccatcggaaatcgctgtttaaaaaa gtccaggaaggcggtctgtgcgaaagacaactcatggataaggaaaataatattgcaact ctgaatgccagcttagaagaaaatcagcaacgccaaaaacgtttcgaagaagatctccgt tcgttcgatagttcacatcaacgcgagtcaattctaaaagatcaacttactcgaatgatt atcgaaaataagataaaagagttgaaaagaacattggccacattcgatggacaaataaat gaagatcgcataactgaacaaaaacaagcttataacaaacttcaaaatgaacttcgcttg attggaaacgaagaagtgaaaatatacactcagatgcaagagtacgagaagcaaaaaaaa attgcggaagcaaaattgtcaacgaaagagtgtcagaatgctgaatcgaattatcgtgat gctatcatagaactggcaattactaaagaatctatctctgatttaacgaagtatagaaat tgtcttgatgcttcactcatccaatttcattctgaaaaaatgggcagggtcaatggaatc attgatgatctatggagaaaagtatataattccacggatattactacaatcaggattaga tcagatgctacttctgagacttcttcaaagaaagtcgcatacgaatacaatgttatgatg gttcatgaaactggcaccgaagttgagatgcgtggacgctgcagtgctggtcaaaaaatg cttgcttcgttgcttattcgcattgcactcgcagaagtattcggtggttcatgctcgatg attgcgttggatgaaccaacaacaaatttggatgagagcaaagtggaaggaatggctatc gttttggcagatataattgctgaaagacgcggattcgatgaaaatggaaagttgagagga agagatatgcagatggtagtaatcactcacgatgagcgactcgtcaacaggatcacaatc agttgtcgtccagagtatatttattgtttggggaaggacgagcacggaataagtttcctt tcgaaacgttatccagatggaacagtgaaaagagttaatacgaagagacggttctag

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