Caenorhabditis elegans (nematode): CELE_T05H10.2
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Entry
CELE_T05H10.2 CDS
T00019
Symbol
apn-1
Name
(RefSeq) Apurinic-apyrimidinic endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CELE_T05H10.2 (apn-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_T05H10.2 (apn-1)
Enzymes [BR:
cel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CELE_T05H10.2 (apn-1)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CELE_T05H10.2 (apn-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF6200
IZUMO
Hat1_N
Motif
Other DBs
NCBI-GeneID:
174291
NCBI-ProteinID:
NP_495687
WormBase:
WBGene00000151
Ensembl:
WBGene00000151
UniProt:
Q10002
LinkDB
All DBs
Position
II:<8047564..8049063
Genome browser
AA seq
396 aa
AA seq
DB search
MANKKVTFREDVKSPAIRKLKQKLTPLKIKKGRGKIQKHIQKTLQKMKEEEESENQSPGT
TVEETLTEENISTDKEETSKLENKPKKTRKTSGETIAQKKSRETVGVEVLKTSEGSSKML
GFHVSAAGGLEQAIYNARAEGCRSFAMFVRNQRTWNHKPMSEEVVENWWKAVRETNFPLD
QIVPHGSYLMNAGSPEAEKLEKSRLAMLDECQRAEKLGITMYNFHPGSTVGKCEKEECMT
TIAETIDFVVEKTENIILVLETMAGQGNSIGGTFEELKFIIDKVKVKSRVGVCIDTCHIF
AGGYDIRTQKAYEEVMKNFGEVVGWNYLKAIHINDSKGDVGSKLDRHEHIGQGKIGKAAF
ELLMNDNRLDGIPMILETPEGKYPEEMMIMYNMDKR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaaaaagtaacatttagagaagacgtaaaatcaccggctatcaggaaattg
aagcaaaaattgactccgttgaaaattaagaaagggagaggaaaaatacagaagcacatc
cagaagacgctgcagaaaatgaaagaagaggaagagtcggaaaaccaaagccctggaact
accgtagaagaaacattaactgaagaaaatatttcaactgataaagaagaaacctctaaa
ctggaaaacaaaccgaaaaaaacaagaaaaacatcgggagagactatcgctcaaaaaaaa
tctcgtgaaacggttggcgtggaagttctgaaaacatctgaaggatcgagtaaaatgttg
ggattccacgtgagtgctgctggaggtcttgaacaagcaatctacaacgctcgagcagaa
ggatgccgaagttttgccatgtttgttcgaaatcagcgaacttggaatcacaaaccaatg
agtgaagaagttgtcgaaaattggtggaaagcggttcgcgagacaaatttcccattggat
cagattgtaccccatggttcatatctgatgaatgctggatcgcctgaagctgagaaatta
gaaaaatcaagacttgctatgctcgacgaatgtcaacgggctgagaaattaggaatcacg
atgtacaatttccatccaggatcaactgtcggaaagtgtgaaaaagaagaatgcatgaca
acaattgcagagacaatcgattttgttgttgagaaaactgagaatattattttagttctc
gagacaatggctggacaagggaactcgattggcggaacttttgaagaactcaagttcatc
attgataaagtgaaagttaagtcaagagtcggagtttgtatcgacacgtgtcacattttt
gctggaggatatgatattagaactcaaaaggcttatgaagaagtgatgaaaaatttcggt
gaagtggttggctggaactatctgaaagcaatacacatcaatgattcgaagggcgatgtc
ggttcgaagctcgatcgtcatgagcatattggtcaaggcaagataggaaaagcggctttt
gagcttttgatgaacgacaaccgtctcgatggaattccaatgattttggaaacgccagaa
ggaaaatatccggaggaaatgatgatcatgtacaatatggataaaagataa
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