Caenorhabditis elegans (nematode): CELE_T19E7.2
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Entry
CELE_T19E7.2 CDS
T00019
Symbol
skn-1
Name
(RefSeq) Protein skinhead-1
KO
K05638
nuclear factor erythroid 2-related factor 2
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04141
Protein processing in endoplasmic reticulum
cel04212
Longevity regulating pathway - worm
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CELE_T19E7.2 (skn-1)
09150 Organismal Systems
09149 Aging
04212 Longevity regulating pathway - worm
CELE_T19E7.2 (skn-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cel03000
]
CELE_T19E7.2 (skn-1)
03029 Mitochondrial biogenesis [BR:
cel03029
]
CELE_T19E7.2 (skn-1)
Transcription factors [BR:
cel03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, NF-E2
CELE_T19E7.2 (skn-1)
Mitochondrial biogenesis [BR:
cel03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Nuclear respiratory factors
CELE_T19E7.2 (skn-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_Maf
bZIP_1
PhaC_N
Motif
Other DBs
NCBI-GeneID:
177343
NCBI-ProteinID:
NP_741404
WormBase:
WBGene00004804
UniProt:
P34707
Structure
PDB
PDBj
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All DBs
Position
IV:complement(<5651039..>5660384)
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AA seq
623 aa
AA seq
DB search
MGGSSRRQRSTSATRRDDKRRRRQCFSSVADDEEETTSIYGVSSIFIWILATSSLILVIS
SPSSNTSIQSSSYDRITTKHLLDNISPTFKMYTDSNNRNFDEVNHQHQQEQDFNGQSKYD
YPQFNRPMGLRWRDDQRMMEYFMSNGPVETVPVMPILTEHPPASPFGRGPSTERPTTSSR
YEYSSPSLEDIDLIDVLWRSDIAGEKGTRQVAPADQYECDLQTLTEKSTVAPLTAEENAR
YEDLSKGFYNGFFESFNNNQYQQKHQQQQREQIKTPTLEHPTQKAELEDDLFDEDLAQLF
EDVSREEGQLNQLFDNKQQHPVINNVSLSEGIVYNQANLTEMQEMRDSCNQVSISTIPTT
STAQPETLFNVTDSQTVEQWLPTEVVPNDVFPTSNYAYIGMQNDSLQAVVSNGQIDYDHS
YQSTGQTPLSPLIIGSSGRQQQTQTSPGSVTVTATATQSLFDPYHSQRHSFSDCTTDSSS
TCSRLSSESPRYTSESSTGTHESRFYGKLAPSSGSRYQRSSSPRSSQSSIKIARVVPLAS
GQRKRGRQSKDEQLASDNELPVSAFQISEMSLSELQQVLKNESLSEYQRQLIRKIRRRGK
NKVAARTCRQRRTDRHDKMSHYI
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgggcggttcatcacgccgtcagcgaagtacgtcggcgacgagacgagacgataaacga
agacgaagacagtgcttctcttcggtagccgacgacgaagaagagacgacgtcaatttat
ggagtgtcgtccatattcatctggatacttgcaacatcatcactgattttggtgatcagt
tcaccatcgtccaacacctcaatccaatcatcgtcatacgatcggatcacgacaaaacat
cttctggacaatatatcaccgacatttaaaatgtacacggacagcaataataggaacttt
gatgaagtcaaccatcagcatcaacaagaacaagatttcaatggccaatccaaatatgat
tatccacaattcaaccgtccaatgggtctccgttggcgtgatgatcaacggatgatggag
tatttcatgtcgaatggtccagtagaaactgttccagttatgccaatactcaccgagcat
ccaccagcatctccattcggtagaggaccatctacagaacgtccaaccacatcatctcga
tacgagtacagttcgccttctctcgaggatatcgacttgattgatgtgctatggagaagt
gatattgctggagagaagggcacacgacaagtggctcctgctgatcagtacgaatgtgat
ttgcagacgttgacagagaaatcgacagtagcgccactcactgccgaagagaatgctcga
tatgaagatctttcgaaaggattctataatggattcttcgagtcgttcaataacaatcaa
tatcagcagaaacatcagcaacaacaacgagaacaaataaagacaccaactcttgaacat
ccaactcaaaaagccgaattggaagatgatctgtttgatgaagatcttgctcagcttttc
gaggatgtttcaagagaagaaggacaattgaatcaactttttgataataagcaacaacat
ccagttatcaataatgtttctctgtcggaaggaattgtttataatcaggcaaatttgacc
gagatgcaagagatgcgtgattcctgcaatcaagtttccatttcaacaattccaacaaca
tcgactgctcaaccagagactttgttcaatgtaaccgattcacagactgtcgaacagtgg
cttccaacagaagttgtaccaaacgatgtgttcccaacatccaactacgcctacattgga
atgcaaaacgacagtcttcaagcagttgtatcaaatggacagattgactatgatcattcc
tatcaatccactggtcagactccactgtctcctctcatcattggatcttcaggacgtcaa
cagcagactcaaacgagcccaggaagcgtcacagtgactgcaacagctactcaatcgttg
ttcgatccatatcactcacagagacactcgtttagtgattgcactactgattcgtcatca
acgtgctctcgcctctcttcggaatctccacgatacacgtcagagagctcaaccggaact
cacgagtctcgtttctacggaaagttggctccatccagtggatcacgctaccaacgatca
tcgtctccacgttcatcacaatcttcgattaagatcgcgagagttgttccactggccagc
ggacaacggaagcgtggacgtcaatccaaggatgagcagctcgccagtgacaacgagctt
ccagtgtcggcgttccagatttcggagatgtcattaagcgagttgcaacaagtgttgaag
aacgagagtctcagcgagtatcaaagacagttgattcgcaagattcgtcgacgcggaaag
aacaaggttgctgcccgcacttgccgtcaaagacgcacggatcgtcacgacaagatgtcc
cattacatctga
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