Caenorhabditis elegans (nematode): CELE_W02D3.10
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Entry
CELE_W02D3.10 CDS
T00019
Symbol
fnci-1
Name
(RefSeq) FANCI helical domain-containing protein
KO
K10895
fanconi anemia group I protein
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
CELE_W02D3.10 (fnci-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_W02D3.10 (fnci-1)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
CELE_W02D3.10 (fnci-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_HD2
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
189113
NCBI-ProteinID:
NP_001021652
WormBase:
WBGene00020935
Ensembl:
WBGene00020935
UniProt:
Q7Z151
LinkDB
All DBs
Position
I:complement(6745991..6753031)
Genome browser
AA seq
1437 aa
AA seq
DB search
MSQAFTQTSQPRRGGGTEKFVDALIKFRQKHPDNLNSVSETSKNAVITNLGILNNDNKWS
SLERLLVQMCSDDRGGRMFEFTHSIFTLLSILPNPTDAENLSIRTIKFLLNTLTKATVSV
PNFFGMYNDLMVQVENISNYGLTQLVDYVSIMLKRANEWKDQAEGEADDTENVARGKNNN
SKMSFNQRWKDFVAVFIKKVRDIDQIELDDELLPGSDAADNILFEWLKTTEDVDAFELIS
EISASSSSGITTPSIDRFCDEVIVEKIGIDTSSDDMDSERKRRSIMTWKSLILTTKTEKE
RLGRLWNGIICAWEISEDEEKEKMEQRKISEHLEKCLTVGHRILNINVESAKKFLTFIRT
DKYRVLSSEFGLCLCLIQCCLDRNDAMMDMKKTFQKLWKIGEQAEECLWMSDIVCGRIIR
LVDLQLRIISENLHSNENLRRILSRPLISLMLSLLDTPAYQKQVVVVDGRVADGCTLWLL
SRDILIIVSQADVDMGAQLSHLFKSIASSSNNSSALILIDVLRELVRKCSVEILNNSKLI
DGLFDYVCRMRKDIAVSLIRCLIPIINTRPQLRNALFKSLKKDLLCESTVGSAVPIVLIL
LRSVSKRREDGGGGQFDHSMSQSFGTFSTQTLNSMGLKKNVDQTVGLELVGIIKRCLWQP
VKTKIALYDGICELATQTSTMLNQFLDMILSHARMIPEWKKSEMTVSIGNIVQIVEPIPH
LIQTMECLMSELLSHDPEFKLEGTELLLRPAANQMEIWVTTAMRNDVSDMGLDKNIEWTT
ATVNGRCSLLFAQMMLSTYDVLIEHMWRRVETTESKEDADKIVALLARRSELDILYKEKT
TTKKEKDKEKEKEEKITIDSSQSEILTSAKTLSSIMTKLIKPAENDGNSTANATINVRPE
IVADVQMELLVWVVGRAKVLSSALVKEYRPLHSILSGTSSLISLSKSLIDLYMGNNCSSW
VSEIDTGSPTRTLAIESYANILQFLSIKFKQTPTRLTSAWFEEKDGEDEETKRKRQEPNI
VALRQAHFLSCRLFRQIIDVENEEIEEEKKPKAQYEMQGRAILKAASAALSLTKNVKVWS
NLFTRVVKVLEDETFYNNQMLRDYCKFIITCSLRCADSDKTTAIEMHEIMENILEFLSEE
NEEMKYHFISKTTINVSIEFQFMFVEKTLALIRDAFTFQKDFFVKPPVFDNMLCTLLTKC
LEVTELVSRILQIFVQYKMMQERVTEIMTSYFTTIQMGVVLLQNLTKGWGKEMSEWQSTN
ILATLVKTKLRPILAMVDDHIGFSKGKDEMKKKISQKTRYAKSKRDEKLFSKFSHEREAV
QHGILVLCKLIKDDRFDLQIKNNSIGYRDFRIDMEVLRNKLSGQANEEVCEPATKRGRRD
PSMEDEEIEETEESTTSARRSSEEPEEPRDQENTVGVVKQEVDDEEESVSRGTSPVF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagcgttcactcaaacttcacaacctcgacgaggaggtggaactgagaaattt
gtcgatgcgctaattaaatttaggcaaaaacatcctgataatctgaattcagtgtccgaa
acgtcgaaaaatgcagtaatcacaaatctagggattctcaataatgataacaaatggtca
tccttggaacggctccttgttcaaatgtgttccgatgatcgtggaggccgaatgtttgag
tttacccactcgattttcacacttctttcgatattaccgaatcctacagacgcagagaat
ctctcaatccgaactatcaaatttcttttaaatactcttacaaaagcaactgtttcggtg
ccaaatttcttcggaatgtacaatgatttgatggtacaagtagaaaatatctcaaattat
ggactcactcagctcgtagattatgtttcaattatgctgaaaagagcgaatgaatggaaa
gatcaagctgaaggagaagcagatgatactgaaaatgttgctagagggaaaaataataat
tcaaaaatgtcattcaatcaacgatggaaggattttgtagcagtttttataaaaaaagtt
agggatatcgatcagattgaacttgacgatgaacttcttcccggatcagatgctgcagat
aatattttgttcgaatggctcaaaactacagaagacgttgatgcatttgaacttatttct
gaaatctcggcttcttcatcttctggaataaccacaccaagtattgatagattttgtgat
gaagtcattgtggaaaaaatcggcatcgatacttcatcggatgatatggattccgaaaga
aaaagaagatcaataatgacatggaaatcattgattttaacaacaaaaactgaaaaggaa
cgacttggaagactatggaatggaataatttgtgcttgggaaattagtgaagatgaggag
aaagagaaaatggagcaaaggaagatatcagagcatttggaaaaatgtctaactgttggc
catcgaattttgaacattaatgtcgaatcggcgaagaaatttcttacatttatcagaacc
gacaagtacagagttctgagtagtgagtttggtctctgcctttgtctgatacaatgctgc
cttgatagaaatgatgccatgatggatatgaagaaaacctttcagaaactatggaaaatt
ggagaacaagctgaagaatgtttatggatgtcagatattgtttgtggacggattatacgg
cttgttgatcttcaacttcgaattatttcggaaaatcttcattctaacgagaatcttcgt
cgtattcttagtcgcccattgatctctctaatgctttctcttctcgatactcctgcttat
caaaaacaagtggtcgtagtagatggacgagttgcagatggatgtactctttggcttctt
agtagagatattttgattattgtatcacaagctgatgttgatatgggagcacaactttca
catctcttcaagtctattgcatcttcatcaaataattcttcagctctgatcttgatagat
gtgctccgcgagcttgtgcgcaagtgttctgtagaaattctgaacaattcgaaactcatc
gatgggctttttgattatgtatgtcggatgcgtaaggatattgctgtatctctaatcaga
tgtcttattccaattatcaatacgagaccacagttaagaaatgcactattcaaaagtctg
aagaaagatttactgtgtgaatcaaccgtaggctcggctgttccaattgtgctcattctt
ctccgtagtgtaagcaaacgacgtgaagatggtggaggtggacagtttgatcactcaatg
tcacaatcatttggaacattcagtacccaaactctgaacagtatgggattgaaaaagaat
gttgatcaaacagttggactcgaattggttggaatcattaaaagatgcctctggcaacca
gtgaagacgaaaatcgcgttgtatgatggcatttgtgaacttgcaacacagacttccaca
atgcttaatcaattcctagatatgattttatcacatgcaagaatgattccagaatggaaa
aaatcagagatgacagtttcaattggaaatattgtacaaatagttgaaccaattcctcat
ttgattcaaactatggaatgtcttatgagtgaattattatcacacgatccggaatttaag
ttggaaggtactgaacttcttctgagacctgccgcaaatcaaatggaaatctgggttaca
acggcaatgagaaatgatgtatcggacatgggattggataagaatatagaatggacgacg
gcaacagtgaatggaagatgttctcttctctttgcccaaatgatgctgagcacttatgat
gtactgattgaacatatgtggagaagagttgaaacaacagaatcgaaagaggacgctgac
aagattgttgccttgctcgcgagaagatcagagttggatatattgtataaagagaaaact
actacaaagaaagaaaaggataaggagaaagaaaaagaagagaagattacaattgattca
agtcaatctgagattcttacaagcgccaaaacgttgtcctcgatcatgacgaaattgata
aagcccgcggaaaatgatggaaatagcacagctaatgctacgataaatgttcgtccggaa
attgtagccgatgttcaaatggagcttcttgtatgggtagttggaagagccaaggtttta
tcatcagcacttgtcaaggaatatcgcccacttcattcgattctttccggcacgagtagc
ttgatttcattgtcaaaaagcctcatcgatctctacatgggaaataactgctcgagctgg
gtgagcgaaattgacacgggatctccgacgagaacactggcaattgagagttatgcaaat
attctacaatttctaagtatcaaattcaagcaaactccgacaagactcacttctgcatgg
tttgaagaaaaagatggtgaagatgaagaaacgaagagaaaacggcaagaacctaatatt
gttgcgcttcgccaggctcacttcctctcctgtcgcctcttccgacagattatagatgtt
gaaaatgaggaaattgaagaggagaaaaagccaaaagcacaatatgaaatgcaaggaaga
gccattttgaaagctgcttcagccgctcttagcctcacgaaaaatgtcaaagtctggtcg
aacttgtttactcgagtcgtcaaggttttagaggatgaaacattttacaacaatcaaatg
cttcgagattactgtaaatttattattacttgtagccttcgatgtgcggactctgataaa
acaactgcaatagaaatgcacgaaattatggaaaatattctcgaatttttaagtgaagaa
aatgaagaaatgaaatatcatttcatctcgaagacgaccatcaatgtgtccatagaattt
caatttatgtttgtcgaaaaaactctggcattgattagagatgcattcacttttcaaaaa
gacttttttgtgaaacctccagtttttgataatatgctgtgcactcttcttacaaaatgc
ttggaagtcactgaacttgtatccagaattcttcaaatctttgtacaatacaaaatgatg
caggaaagagtcacggagattatgacaagttacttcaccacaattcagatgggagttgta
ttgcttcaaaatcttacaaaaggatggggaaaagaaatgtccgaatggcagagtacaaat
attcttgccacgttggtaaagacaaaattaaggccgattcttgcgatggtggacgatcat
attggattctcgaaaggaaaagatgaaatgaagaaaaagatttcacagaaaacaagatat
gcaaaatcgaaacgagacgaaaaactattttcaaagttttcacacgaaagagaagctgtt
caacatggaattcttgttctttgtaagctcattaaagatgatcgatttgatcttcagatc
aagaacaattcaattggatatcgtgacttccgaatcgatatggaagttcttcgcaacaaa
ttgagcgggcaagctaatgaagaagtttgtgaaccagccaccaaacgaggccgtagggac
ccaagtatggaagatgaagaaatagaagaaactgaagagagtacaacatctgcaagaaga
agctccgaagaacccgaagagccaagagatcaagagaacactgttggagtggtgaagcag
gaggttgatgacgaagaagaaagtgtctccagaggcacgagtccagtcttctga
DBGET
integrated database retrieval system
