Caenorhabditis elegans (nematode): CELE_W04D2.1
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Entry
CELE_W04D2.1 CDS
T00019
Symbol
atn-1
Name
(RefSeq) Alpha-actinin, sarcomeric
KO
K05699
actinin alpha 1/4
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_W04D2.1 (atn-1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cel04812
]
CELE_W04D2.1 (atn-1)
04147 Exosome [BR:
cel04147
]
CELE_W04D2.1 (atn-1)
Membrane trafficking [BR:
cel04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
CELE_W04D2.1 (atn-1)
Cytoskeleton proteins [BR:
cel04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
CELE_W04D2.1 (atn-1)
Exosome [BR:
cel04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CELE_W04D2.1 (atn-1)
Exosomal proteins of colorectal cancer cells
CELE_W04D2.1 (atn-1)
Exosomal proteins of bladder cancer cells
CELE_W04D2.1 (atn-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
179709
NCBI-ProteinID:
NP_001256423
WormBase:
WBGene00000228
Ensembl:
WBGene00000228
UniProt:
H2L2C9
LinkDB
All DBs
Position
V:<12478411..>12484449
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AA seq
849 aa
AA seq
DB search
MLLLEVISGEPLPKPDRGKMRFHKIANVNKALEYIESKGVKLVSIGAEEIVDGNVKMTLG
LIWTIILRFAIQDINVEELSARDGLLLWCQRKTAPYNNVNVQNFHNSWKDGLAFCALIHR
HRPDLLDYSQLHKGDPIHNLNLAFDIAEKHLDIPKMLDAEDVSRHPDEKSTMTYVSCFYH
AFRNMRDPPPPVIRQPPPQRVVVAPPPERDWRKDAETAANRICRVLKVNQENEKMMEDYE
NLASDLLAWINRWMPWLANRSTDDTLQQAQQKLEDYRNYRRREKPPRIEDKGRLETLFNT
LQTRLRLSNRPAFLPRDGHLIKDINAAWAGLEDSEKGFEEWLLSEIMRLERLEHLAEKFR
RKCALHEEWAHGKEDALRSNDWRSCGLYKIKALRKRHEAFESDLGAHQDRVEQIAAIARE
LNNLRYPDIGPINARCQAICSQWDRLGQLSSKRRETLEDAERIAERLDSLYLDFAKRAAP
FNNWLDGAREDLADLVIVHEMREIEELVNAHDQFKSTLGDADREFSSINQIEHEVEHLVT
SHGLDRELLRNPYTDLSASDIRRKWGEVQNSVPRRDSQLQAELKRQQNNERLRTIFAEKA
NQVGPWLERELEQVLAIGLGGRGRLEDAIQQLRSIQRNVLGYKPNLDELERVHQEMQENF
VFENRKSRYSMESLRVGWETLLTSINKTINEFENQVLLRDSKGISEEQIAEFRASFSHFD
KERAGLDPEQLRSCLISVGYTIRPGREGDAELHRVLAHVDPNRMGRVPFEAFLDFMTKEN
SDQDTVEQMIDSFRILASGKTFITADELERELPRDQAAYCMARMAPSREPGAPPRSFDYV
TFSRSLYSQ
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttctcgaagttatctctggagaaccacttccaaaaccagatcgaggaaagatg
cgtttccataaaattgccaacgtgaataaagctctcgagtacatcgaatcgaagggtgtc
aagttggtctccattggagctgaggaaattgtcgatggaaatgttaaaatgactcttggt
ctgatttggaccatcattttgagatttgccatccaggatattaacgttgaagagctctct
gctcgtgatggacttcttctttggtgtcaacgcaagactgctccatacaataatgtgaat
gtgcagaacttccacaactcatggaaagatggacttgccttctgcgctctcattcatcgt
catcgtccagatttgttggactacagccaacttcacaagggagatccaattcataatttg
aatttggccttcgatattgccgagaagcatcttgatattccaaaaatgttggacgccgaa
gacgtttcacgtcatccggatgagaagtccacgatgacatatgtctcgtgcttctatcac
gcattccgtaacatgcgtgatcctccaccaccagttattcgccaaccaccaccacagcgt
gttgttgttgctccacctccagagagggattggagaaaagatgcggagactgctgctaac
cgtatctgcagagttttgaaagtcaaccaagaaaatgaaaagatgatggaggattatgaa
aatttggcttctgatcttctcgcctggatcaatcgctggatgccatggcttgctaacaga
tcgactgatgacacccttcaacaggcccagcaaaagctcgaggactaccgtaactaccgt
cgtcgcgaaaagccaccacgtattgaagataagggacgtcttgaaacacttttcaataca
cttcagacccgtcttcgtttatccaatcgtccagctttccttccacgcgatggtcatctt
atcaaggatatcaatgctgcatgggctggtcttgaagattccgaaaaaggattcgaagag
tggctcctttctgaaatcatgcgtctagaacgattggaacacttggctgagaaattccgt
cgcaagtgtgctcttcatgaggaatgggcccatggaaaggaagatgctcttcgtagcaac
gattggagaagttgtggactttacaagatcaaggctcttcggaaaagacatgaagcattt
gaaagtgatcttggagctcatcaagaccgtgttgagcaaattgcggcaattgccagagag
ctcaacaacctccgttatccagatattggtccaatcaatgcacgttgtcaagcaatttgc
tctcaatgggatcgtcttggacaactttcctcaaagagacgtgagactcttgaagatgct
gaaagaattgccgaacgtctcgattcactctatttggacttcgccaagcgtgctgctcca
tttaacaactggcttgatggagctcgtgaagatcttgctgacttggtaattgttcatgaa
atgcgcgagattgaagagctcgtcaatgctcatgatcaattcaaatctacattgggagat
gctgatcgcgagttttcaagcatcaatcaaatcgagcatgaagttgaacatcttgtcact
tcacatggacttgatcgtgaattactccgcaacccatacactgatctatcagcttccgat
attcgcagaaaatggggagaggttcaaaattcagtgccaagaagagattcgcagcttcag
gccgagttgaagagacagcaaaacaacgaacgtctccgtacaatcttcgccgagaaggct
aatcaagtgggaccatggcttgagagagaactcgaacaagttctcgctatcggacttggt
ggtcgtgggcgtcttgaagatgcaatccaacaacttcgttctattcaacgaaatgttctc
ggatacaaaccaaatcttgatgagcttgaacgagttcatcaagaaatgcaagaaaacttt
gtatttgaaaaccgtaaatctcgttactcaatggaatcgcttcgtgtcggatgggaaact
ctccttaccagtatcaacaaaacgattaatgaattcgaaaatcaagtattgctccgtgac
agtaaaggaatcagtgaagaacaaatcgctgagttccgtgcgtcattcagtcattttgac
aaggaacgtgctggtttggaccctgaacaacttagatcttgcctcatttccgttggctat
acgatcagaccaggacgtgaaggcgatgcggaacttcatcgtgttttggcacacgttgat
ccaaaccggatgggacgtgtaccatttgaggcattcctcgatttcatgaccaaagaaaac
tcggatcaagatacggttgaacagatgattgattcattcagaatacttgcatctggaaag
acattcataaccgctgatgaattggaacgagaattaccacgcgatcaagcagcttactgt
atggcacgaatggctccatcaagggaaccaggagcaccaccacgatcattcgattacgtc
acattcagtcgtagtctttattcacaataa
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