Caenorhabditis elegans (nematode): CELE_W06B4.3
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Entry
CELE_W06B4.3 CDS
T00019
Symbol
vps-18
Name
(RefSeq) Vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04140
Autophagy - animal
cel04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CELE_W06B4.3 (vps-18)
04148 Efferocytosis
CELE_W06B4.3 (vps-18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_W06B4.3 (vps-18)
Membrane trafficking [BR:
cel04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
CELE_W06B4.3 (vps-18)
Hops complex
CELE_W06B4.3 (vps-18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
zf-RING_Vps41
TPR_19
zf-RING_5
zf-RING_16
TPR_GEMI5
RL
Prim-Pol
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
173783
NCBI-ProteinID:
NP_494788
WormBase:
WBGene00021058
Ensembl:
WBGene00021058
UniProt:
Q23194
LinkDB
All DBs
Position
II:4461130..4467896
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AA seq
1026 aa
AA seq
DB search
MIKNTAKNKNGIITRATIDLKKDLKFVKLTAVSNLAVQNGEMLAAVTEKLLVHYSEGTGE
RHQEMSLPLNGPDHVAYIHLSRTGFHAIVSSKLGHNFYIHLKSNAFHHLKKLRCVVTAVG
WNPDYSKETDTTGPILLGTAQGSIIELNVGSTGMMTTLKELTSQVAQIAEQRITSAPSPA
AAITDIQLFQLADDDPKNKKWMVIIAQMARLIVLITDNEPAPVVKLGGFTSSASLQAGLM
NLATEQAPSTTFHSFFTSPNTLQHTISSSKFSEKFKNHGFLTMHPTIAEPKRYAWLSPDG
ISIGNVNIYAERIQDVLVEEFNIEHRLIEGRLEPPTGIALTDYHVLLAYSSRVLALSLLP
PHDVIFEDPWNPELGGALGFVSDNVAEFVWLYTQTFAMKYGTNDEARYIWKTYLDRGEYQ
KALQIARTRVAIEPDALEMVLRKQADFYIQEKNFTAAAEILAQSSEPFESVVLKFLTNSS
ERKMGLKTLLDKKLERLTRHEDKIRRDALVMWLLNVQLEELAEMRRLKNSNPDPAFVEKL
RDTTDHVQRYFMRKNVIESIQTNRDAVYRMCVAHADFEMQLFFANAVKDLRTVIDILMLR
EQYFEVLEVLKNQRISELTYEMCPLLIEHIPKQVIVYLIQNQDQISPQKLTPCLSLCVKN
MEMAIPAIKYLEAQFKGTQTISQNPQNLANLHNIYIHLMAKFRREKLLGYLESHGTIRSD
LPYELDFAMRTCEQFKIEPCVVYLFCVAGMFGDAVEKALGFDVDLAKKCALMMEEAEANF
AWLEGMEDPAATSYIRQKLDEKAKKAIWLKIGQYYVTQENNVDKCIELINESNHLLTIQD
LLPIIPKFTRVGALKPIIVDFLKRNKQRLEKLERSMKEATEIASEIRDKQEKLKNRTTVV
KPSDVCSHCARPISGRAFNVHSCRHFFHRECLEIAMISFLSQEEVEKMKTLIIDEERVLS
QMKAEQLAGNQKGFIEKQEKYLKIAAFISNIVGAECPLCGNIAISQIDKQFLSDEEFAAD
LNTWLL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaacactgcgaaaaacaaaaatggaattattactcgggcaactatcgacttg
aaaaaagatttgaaattcgtaaaattgaccgccgtatccaatttggccgttcaaaatgga
gaaatgctcgcggcggtcactgaaaagctgctcgttcattacagcgaaggcactggggag
aggcatcaagaaatgtcacttcctctcaacggccctgatcacgtggcatatatccatctt
tcgcgtaccggattccacgcaattgtatcatcaaaactaggccataacttctatattcat
ctgaaaagcaacgcatttcatcatttaaagaaacttcgttgcgtggtgactgctgttgga
tggaatccggattattcgaaagaaaccgacacaactggaccgatccttctcggaaccgct
cagggatcaataattgagctgaacgtcggaagcactggaatgatgacgacactgaaagaa
ctgacgtcacaagttgctcaaatcgccgagcaacggatcacaagcgccccgtcaccggca
gcagcgattacagatattcaactattccagttggcggatgatgatccgaaaaataagaaa
tggatggttataatcgctcagatggctcgcctgatcgttctgatcacagataacgagccg
gcgccagttgtaaagctcggaggattcacgagctctgcgtctcttcaagcaggcttaatg
aatcttgcaacagaacaagctccttctacaacattccattcattcttcacatcaccaaat
actctacaacacacgataagctcttcgaaattctcggaaaaattcaaaaatcacggattt
ttgacgatgcacccgactattgcagagccaaagagatatgcgtggctttcgccggatgga
atttcgattggaaatgttaatatttatgcggagaggattcaagatgttttagtggaagag
ttcaatattgagcaccgcttgattgaaggccgcctggaacctccaacaggaatcgctttg
accgattaccacgtgcttcttgcctactcttcccgggtacttgctctgtcacttcttcca
ccacatgacgtcattttcgaagatccttggaacccggaactcggtggagcattgggtttt
gtcagtgataatgtcgctgaatttgtatggctctacactcaaacctttgcaatgaaatat
gggacaaatgatgaggctcgatacatttggaagacttacttggatagaggagaatatcaa
aaagcactacaaattgctagaactcgggttgcaattgaaccggatgcactggaaatggtt
ttgaggaagcaggcggatttttatattcaggagaaaaacttcaccgcggccgccgaaatc
cttgcccaatcgagtgaaccgttcgaaagcgtagttctaaagttcctcaccaactccagt
gaacgaaaaatgggcctaaaaaccctcctagacaagaagctcgagcggctcacccgccac
gaggataaaatccgacgggatgctctggtaatgtggctgctcaatgtgcaattggaagag
ctcgccgagatgcgacgactcaagaatagcaatccggatcccgcatttgtggagaaactt
cgagacactacggatcatgttcagcgatattttatgcgaaaaaatgtgattgaatcgatt
caaacgaatcgagatgcggtctatcggatgtgtgtagctcacgcggattttgaaatgcaa
cttttctttgcgaacgctgtgaaggatctacgtaccgtcattgatattctgatgctccgc
gagcagtactttgaagtgttagaagtactgaaaaatcagcggatttctgagttgacgtac
gaaatgtgcccacttcttatagaacatataccgaagcaggttatcgtgtatcttatccag
aatcaggatcagatttcgccgcaaaagttgacgccgtgcttgtcgctttgtgtaaagaat
atggaaatggcgattcctgcgatcaaatatttggaggcacaatttaaaggaacacagacg
atttcccaaaatcctcaaaatctggcaaatctccacaacatctacatccatctaatggca
aaattccggcgagaaaaactgctcggatatctggaatcgcatggaactattcgctccgac
ctcccatatgaattagattttgcaatgagaacgtgtgaacaatttaaaattgaaccatgt
gttgtatatcttttttgtgttgctggaatgtttggtgatgctgtagaaaaagcattggga
tttgatgttgatttggccaaaaaatgtgctctaatgatggaagaagctgaagcgaatttc
gcgtggttggagggaatggaggatccggcagcgactagttatatcaggcagaagttggat
gagaaggcgaagaaagccatttggttgaaaattggccagtattacgtcactcaagagaat
aatgtcgacaagtgcatcgaattaatcaacgaatcgaatcatcttctgacaatacaagat
cttcttccaattattccaaaattcactcgagttggtgctctcaaaccgattatcgtagac
tttttgaaacgaaacaaacaacgtctcgaaaaactggaacgatcaatgaaagaagccact
gaaattgcttcagaaatccgtgataaacaagaaaaactgaaaaatcgaacgacagttgtg
aagccgtcggatgtttgctcacattgtgctcggccaatttctggaagagctttcaatgtt
cactcgtgccgtcattttttccatcgagaatgccttgaaatcgctatgatttcattttta
tcgcaggaagaagttgaaaaaatgaagacgctgataattgatgaagaacgagttttaagc
caaatgaaagcagagcagttggctggaaatcagaaaggatttatcgagaaacaggagaaa
tatctgaaaattgcggcttttatctcgaatattgttggagcagagtgcccattgtgtgga
aatattgccatttcacaaatcgacaaacaattcctgagcgatgaagaattcgcggccgac
ctcaacacctggcttctataa
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