Caenorhabditis elegans (nematode): CELE_Y116A8C.32
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Entry
CELE_Y116A8C.32 CDS
T00019
Symbol
sfa-1
Name
(RefSeq) Branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_Y116A8C.32 (sfa-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_Y116A8C.32 (sfa-1)
Spliceosome [BR:
cel03041
]
Complex A
Other components
Complex A specific factors
CELE_Y116A8C.32 (sfa-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
zf-CCHC_6
zf-CCHC_4
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
178486
NCBI-ProteinID:
NP_503033
WormBase:
WBGene00013808
Ensembl:
WBGene00013808
UniProt:
G5EF97
LinkDB
All DBs
Position
IV:complement(17103825..>17110982)
Genome browser
AA seq
699 aa
AA seq
DB search
MSKTGGNTEPMPFIRKWGNEAGEDLGAAPSATAAPPPALVVPTISSMSSGDNKSPSRSES
VSDRKRDRSRSRDRDRKKDRKKKDRSRERDRERRSSRSRSRSPRDRDRERRRRRSRSPPP
RRRSRSGGDRRRRERSPPSMVPNSPQRVKEPVINPLIREDLAAAVESGAVPVEAVQAGAV
VALNPAKKERRSRWSTTKSFVPGMPTILPADLTEDQRNAYLLQLEIEDATRKLRLADFGV
AEGRERSPSPEPVYDANGKRLNTREVRKRQELEQLRHEKIQALLKINPNFKPPADYRAPN
IRLHDKVWIPQEQFPDLNFVGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKEGKLTNRLG
PMPGENEPLHAYVTGTDMNVIKKACEKIKQVIAEATALPDNNELRKLQLRELALLNGTFR
PEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKGMYASEAG
MDDEYSALMAELGETPAAGAGAGGGGGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAH
GGAGRGGGYQGGRGGGRGFQNPRDLFGPPKGEEEQQQQANASMQHGYYDHYQQYAYPNQY
QQPYGAPAPPGGSAYGHQQQQQQQQQQDYSDFYTSPGARGGAGAKANKGWYGSGGGSSMP
MPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPPS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaactggtggaaacacggagccaatgccattcatccggaaatggggcaacgaa
gctggcgaagatttgggagctgcccccagtgcaacagcagctccaccaccagcacttgtt
gtgccaacaatttcctccatgtcgtctggtgataataaatcgccatctcgttcggaatcg
gtgtctgatcgaaaaagggaccgatcacgttctcgtgatcgtgaccgcaagaaggatcga
aagaagaaggatcgttcacgtgaacgagatcgtgaacgccgatcctctcgttcccgttct
cgatctcctcgagatagagatcgtgaacgtcgtcgtcggcggtctcgatcaccaccacct
cgtcgtcgaagccgaagcggtggagatcgtcggcgtagagaacgatcacctccgtcaatg
gttccgaatagtccgcaacgagttaaagaacctgtgataaatccattgattcgggaagat
ttggctgcggctgttgaaagtggagcagtacctgttgaagctgtacaagctggtgcagtt
gttgcgttgaatcccgccaaaaaagaaagaagaagtcgttggtctacaacaaaaagtttt
gttccgggaatgccaacaattctaccagctgatttgactgaggatcaacggaatgcatat
cttcttcaactcgaaattgaggacgccacacggaaactacgtctcgcagattttggagtc
gccgagggaagagaacgatctccatctcctgaaccagtttacgacgcaaatggtaagcgg
ttgaacactcgtgaagtgcggaaacggcaggaattggaacagttgagacatgagaaaatt
caagctttattgaagattaatccgaatttcaaaccgcccgctgactatcgtgctccaaac
atccgtctacacgacaaagtctggattccccaggaacaatttcctgatctcaattttgtc
ggcctactcattggtccacgtggaaatacgctgaaaagcttggaagctgaaactggagcc
aagattattatcagaggaaaaggatctataaaagagggaaaattgacgaatcgactcgga
ccgatgcctggagaaaatgagccattacatgcatatgtaactggaactgatatgaatgtt
atcaaaaaagcatgtgagaagattaaacaagtgattgctgaagccactgctctgccggat
aacaatgagctcaggaagctgcaactgagagaactcgcactgttgaatggaactttccga
ccggaggatttggcaaacggagctcgttgctcgaattgcggctcagacgagcacaaatca
tgggaatgcccggatgctccaaatgtgacaaatcaaataaaatgtacaaattgtggagca
tttggtcatatttcaaaggattgtaaaaatccaaagggaatgtatgcatcagaagctgga
atggatgatgaatattcggctctgatggctgaattgggtgaaactccggctgctggagct
ggagccggaggaggaggtggaggacatgttgcatcagctggtggtggaatttcagcaatg
actggagcaggaggagaagctcctggtggtggagctggaggacgaggtggtggagctcat
ggaggagctggaagaggtggaggatatcaaggtggacgtggaggaggacgtggattccag
aatccacgggatttatttggaccaccgaaaggagaagaagagcagcaacagcaggcgaat
gcttcgatgcagcatggatattatgatcactatcaacaatacgcctatcctaatcaatat
caacaaccttatggtgcacctgcacctccaggaggatcagcttacggtcaccaacagcag
cagcagcagcagcaacaacaagactacagtgatttctacacaagcccaggagcccgtgga
ggagctggagccaaagccaacaaaggatggtacggaagtggtggcgggtcgtctatgccg
atgcctgtacctccaccaggcggcctaggcggtttcatgcctccaccacctccaccacca
ccaatgcctggagatttgtcgtcacttttggccgctgctccaccgccaccgcctagttaa
DBGET
integrated database retrieval system
