Caenorhabditis elegans (nematode): CELE_Y116A8C.34
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Entry
CELE_Y116A8C.34 CDS
T00019
Symbol
cyn-13
Name
(RefSeq) Peptidyl-prolyl cis-trans isomerase E
KO
K09564
peptidyl-prolyl isomerase E (cyclophilin E) [EC:
5.2.1.8
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_Y116A8C.34 (cyn-13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_Y116A8C.34 (cyn-13)
03110 Chaperones and folding catalysts [BR:
cel03110
]
CELE_Y116A8C.34 (cyn-13)
Enzymes [BR:
cel01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
CELE_Y116A8C.34 (cyn-13)
Spliceosome [BR:
cel03041
]
Complex B
Other components
Prp19-related factors
CELE_Y116A8C.34 (cyn-13)
Complex C
CELE_Y116A8C.34 (cyn-13)
Chaperones and folding catalysts [BR:
cel03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
CELE_Y116A8C.34 (cyn-13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
RRM_1
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
178487
NCBI-ProteinID:
NP_001255925
WormBase:
WBGene00000889
Ensembl:
WBGene00000889
UniProt:
Q9U2S6
Structure
PDB
PDBj
LinkDB
All DBs
Position
IV:complement(<17111081..>17116657)
Genome browser
AA seq
331 aa
AA seq
DB search
MNTNFPHNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD
MAEDAAMAIDNMNESELFGKTIRVNFARPPKATERSQKPVWADDEWLKKYGRGGEAAAEE
DGDAEKAATSSSSASTKLPRVYLGVKIGIRYIGRIVIELRTDVTPKTAENFRCLCTGERG
FGYEGSIFHRIIPKFMLQGGDFTKGDGTGGKSIYGTKFDDENFTLRHTMPGTVSMANCGA
NTNGSQFFICTEKTDWLDGKHVVFGHVVEGMNIVRQVEQQGTPSGKPQMVVKIVESGEIE
PEKRIAAEKLAQKAVVPGAEIQEPLPQAMET
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgaattttccacacaatcggaaaagaacgctctacgtcggaggtttcaccgag
gatgtcactgaaaaagtgttgatggccgcgttcattccgtttggagacgtcgttgccatc
tcgattccgatggattacgagtcgggaaagcatcgtggcttcggattcgtcgaattcgat
atggctgaggatgcggcgatggcgattgataatatgaacgagagcgagctgttcggaaag
actattcgtgtcaactttgctcgtccaccaaaagccaccgaacgctcacagaaacctgtc
tgggcagacgacgaatggctcaaaaagtatggaagaggtggagaagctgctgcggaagaa
gacggagacgctgaaaaagccgccacgtcatcgtcgtcagcctcgacgaagcttccacgt
gtctatctgggagtgaagattggaattcgatatattggacgaatagtgatcgagttaaga
actgacgttacaccgaaaactgccgaaaacttcagatgtttgtgcacaggagaacgagga
ttcggttatgaaggatcgatatttcatcggattattccaaaatttatgcttcaaggcggt
gactttacgaaaggagacggaaccggcgggaagtcgatctatggaacgaaatttgatgat
gagaatttcacgctccgccacacaatgcccggcacagtttcaatggcgaactgcggtgcg
aacacaaatggctcacaattcttcatttgcaccgagaaaaccgattggcttgacggaaaa
cacgtagtgttcggtcatgttgttgaaggaatgaatattgtacgacaagtcgaacagcaa
ggaactccgtctggcaaacctcagatggttgtgaaaatcgtggaaagcggggaaattgag
ccggaaaaacggattgccgccgaaaaattggcccagaaggcagttgttccgggagccgag
attcaggagccgcttccgcaggctatggagacttaa
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