Caenorhabditis elegans (nematode): CELE_Y23H5B.5
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Entry
CELE_Y23H5B.5 CDS
T00019
Symbol
Y23H5B.5
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CELE_Y23H5B.5 (Y23H5B.5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_Y23H5B.5 (Y23H5B.5)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CELE_Y23H5B.5 (Y23H5B.5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
WDR54
Beta-prop_NUP159_NUP214
Kelch_6
Motif
Other DBs
NCBI-GeneID:
171811
NCBI-ProteinID:
NP_490990
WormBase:
WBGene00021276
Ensembl:
WBGene00021276
UniProt:
Q9N477
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All DBs
Position
I:2498134..2506259
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AA seq
561 aa
AA seq
DB search
MAQPYLPAEKFLSRKQETILLDEDVIYWKRMQQLTVFQEPAVVSSVRISPKKPYHVATTS
SVRLTLYDTVVCEPLNLFSRFKKGVCSIDFRHDGRLLAIGGDEGKVRIFDVEKTTGSSKV
ALRVMQASQSTVKSVHFSPRGDTVFSMADDGKIKQYRVADTAYGVNAVPIIEIQAHEDAI
RCGAVSSINDHIVLTGGYDHKVRLWDIRSKEKSLELDCEHPVESVLFLPGEQLIATAAGP
IVKIWDTTTGRQLTALQAHYKTVTSLRLATNSTCLLSAGIDRRVNAFRTTNYSLINSWSM
PSPVLDIDVSRDDQTMAIGMGNLLALYRRAEIKKEATASAAIEDKRSLIRTSAPPVKLVE
KDRDMQKVDVVAKNADKLKIPKIDGMLSNFKHAAVIKLLFGGKFRSAMDTAVVSYLRVIV
MRGAIHRALAGQERSVQKNILVFLNHNLYKAQYFSTLKEVVNAFFDVYALEKLDKDVVKH
VQSLRGSLGRELEVQKMISSLIGSIDLIVSTTKMNVKSSSTALIEDNDVFGEPTIRARDL
DELKPSDQGAEEEYEENMQIN
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaccatacctccccgcagagaaatttctctccagaaaacaagagacaattctt
ttggacgaagatgtcatttattggaaacgaatgcaacaactcaccgtattccaggagcca
gccgtcgtcagctccgtcagaatttcaccgaaaaagccgtatcacgtggcaacgactagc
agtgtccgtctaacactctacgatacagtagtctgtgaaccattgaacctatttagtaga
ttcaaaaaaggagtatgctctattgattttagacatgatggacggcttttggcaatcgga
ggtgacgagggaaaagttcgcatctttgacgtggaaaaaacgacgggctcgagtaaagtt
gctcttcgtgtaatgcaagcttctcagtcaactgtgaaaagtgttcatttctctccacgt
ggtgatactgtcttctcaatggccgatgacggaaaaatcaagcaatatcgagtggcagac
acggcttacggagtaaatgccgttccaataattgaaattcaagcacatgaagatgcgatt
agatgtggagcagtttcatcaattaatgatcatattgtactgactggtggttatgatcat
aaagttcggctatgggatattagaagtaaagagaaatcattggaactcgattgcgagcat
cctgttgaatcggtgctctttttgcctggagagcagcttattgccactgctgcaggtcct
attgttaaaatctgggacacaacaacgggccgccaactgacagcacttcaagctcactac
aagacagtaacatctcttcgtctggccaccaattccacatgcctcttgtctgccggaatt
gatagacgtgtgaatgcattcagaacaacaaattattcattaatcaactcatggtcaatg
ccatcaccagtacttgatattgatgtatcacgtgatgatcaaacaatggcaattggaatg
ggaaatctgttggctctgtaccgaagagctgagattaagaaagaagccactgcgtctgca
gccattgaagacaaaagatcgctgattcgaacgtctgcaccgcctgtgaagcttgtcgaa
aaggatcgagatatgcagaaagttgatgtggtggccaagaatgcggataaactgaaaatt
ccgaaaattgatggaatgctttcgaattttaagcatgcggcggttattaagctccttttt
ggaggaaaattccgttcggcaatggatacggcagttgtcagttatcttcgagtaatcgta
atgcgcggagccattcatcgagctctggctggtcaggaaagaagtgttcaaaagaatatt
ctagtattcctcaaccacaacctctacaaagcacagtatttctccactttgaaggaagtt
gtcaacgcgttttttgacgtctacgcactggaaaaactggataaagacgttgtaaagcac
gttcaaagtcttcgaggatcccttggaagagagcttgaagtacaaaaaatgatttcctca
ttgattggatcaattgatttaatcgtttccaccaccaaaatgaatgtgaaaagttcctcc
acggctctgattgaagataatgatgtattcggagagccgacgattcgagcaagagattta
gatgagttgaagccttcggatcaaggagctgaggaggaatatgaagaaaatatgcagatt
aattga
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integrated database retrieval system
