Caenorhabditis elegans (nematode): CELE_Y23H5B.6
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Entry
CELE_Y23H5B.6 CDS
T00019
Symbol
ddx-10
Name
(RefSeq) ATP-dependent rRNA helicase SPB4-like C-terminal extension domain-containing protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_Y23H5B.6 (ddx-10)
Enzymes [BR:
cel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CELE_Y23H5B.6 (ddx-10)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
90S particles
Helicases
CELE_Y23H5B.6 (ddx-10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTE_SPB4
Thioredoxin_2
Motif
Other DBs
NCBI-GeneID:
171810
NCBI-ProteinID:
NP_001293289
WormBase:
WBGene00021277
Ensembl:
WBGene00021277
UniProt:
A0A061ACL9
LinkDB
All DBs
Position
I:<2489976..>2497381
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AA seq
317 aa
AA seq
DB search
MDDSGNSLLMVSPSQEEAMIGKLEKHSIPIEELKIHPDAMSDVRVKLRAILAESQELKEY
AQKSIVAYLRSIYTMKDKKVFDVEAIDAAALADSFGLVSVPRVRFLNKKAKKSGEKLMEK
EVKEEEEEASLVGKFAIDEDDEDIFTVKKPTGEPEQIKEEEAAEKISNITISKTKPLKKA
VTKVSAAKKILNKKLKVNTKKTFGAEDDELEELEEGPSTITSYGLDIEKARQEIKSGDKE
DRKRFKLLREQRRQEKLAKKNRRAEEEEAVEYDEDGSEDEPDISWLPDPDAVRRKYEEEP
DEVEDLEQQALAALGRK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggatgattctggaaactcattgctcatggtgagcccgtcacaagaagaagcaatgatt
ggcaagttggagaagcactcgattccaattgaagagctcaaaattcatcctgatgcgatg
agcgatgttagggtgaagcttcgggcaattctcgcagagtcacaggagttgaaagagtac
gcacagaagagcattgtcgcatatcttcgatcgatttatacgatgaaagataagaaggtt
tttgatgtggaggctattgatgcagctgctctggcggattcttttggactggtttcagtg
ccaagggtcaggtttttgaataagaaggccaaaaaaagcggcgaaaaattgatggagaag
gaagtaaaagaagaagaagaagaagcttccctagttggaaaattcgcaattgatgaggac
gatgaggatatattcacagtgaaaaagcctacaggagagcctgagcagatcaaggaagaa
gaagccgctgaaaagatctcaaatatcaccatttccaagacgaaaccgctcaaaaaagca
gtgacaaaagtgtcggcggcgaagaaaatcctcaacaaaaagcttaaagttaacacgaaa
aagacatttggagcagaagatgatgagctcgaagagctcgaagaaggcccctcaactatc
acctcctatggtttggatattgaaaaagcccggcaggagatcaaaagtggcgataaggag
gatcggaaaaggttcaagctgctccgcgagcaacggagacaggagaagcttgcgaagaag
aatcggagagctgaggaggaagaagctgtggagtatgatgaggatggaagtgaggatgag
ccggatatctcgtggctcccggatccggatgcggttagaaggaagtatgaggaggagccg
gatgaggtggaagatttggagcaacaggctcttgcggctcttgggaggaaataa
DBGET
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