Caenorhabditis elegans (nematode): CELE_Y37E11AR.2
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Entry
CELE_Y37E11AR.2 CDS
T00019
Symbol
siah-1
Name
(RefSeq) E3 ubiquitin-protein ligase siah-1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04120
Ubiquitin mediated proteolysis
cel04137
Mitophagy - animal
cel04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CELE_Y37E11AR.2 (siah-1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
CELE_Y37E11AR.2 (siah-1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
CELE_Y37E11AR.2 (siah-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cel04121
]
CELE_Y37E11AR.2 (siah-1)
Enzymes [BR:
cel01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CELE_Y37E11AR.2 (siah-1)
Ubiquitin system [BR:
cel04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
CELE_Y37E11AR.2 (siah-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
177138
NCBI-ProteinID:
NP_500409
WormBase:
WBGene00021369
UniProt:
Q965X6
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Position
IV:3744048..3747351
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AA seq
419 aa
AA seq
DB search
MSNRNGGGGGGDYQDVIESLRRTQLIFEEDDNNSSDSAPQANHLSRHQTSNSLVEDMVNH
SNGNPPPVPPGITQQQCQIGLTPRMSASPPSAVSTISGTAVLGKTMARVQSNPPGSIPHN
TTTTAQGIQSVAPHIPIGGGGATDDSSAEILSVFECPVCLEYMLPPYMQCSSGHLVCSNC
RPKLQCCPTCRGPTPSVRNLGLEKIANTVRFPCKFSTSGCPLNFHHADKTEHEELCEFRP
YCCPCPGASCKWQGGLSDVMEHLKKIHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCF
DYNFMLVLEKQEKYDPAQPTQMFYAVVQLIGSKKEADNFVYRLELSASRRRMSWEATPRS
IHEGVVVAIQQSDCLAFDSNAAQLFAENGNLGINVTISRIDTPQRRHPNELENSDLEYD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcggaacggtggtggaggaggaggagactatcaggacgtgatcgagtctctt
cgtcgtacacagctcatctttgaggaggacgataataatagtagcgattcggctccgcaa
gcgaatcatctatccagacatcagactagcaattctttagtcgaagatatggttaatcac
tcaaatggcaaccctccaccggtcccgccaggcatcacacaacagcaatgtcaaatcgga
ttgacacctcggatgtcggcatcgccaccgtctgcagtgtcaacaatctctggaaccgca
gtgcttggcaaaacgatggccagagttcagagtaatcccccgggaagtataccgcacaac
acaacgacgaccgcgcaaggaatccaaagcgtcgcaccacatattccaatcggcggcggt
ggagccaccgacgacagcagtgcagagatcttgtcggtgtttgagtgcccggtatgcctg
gagtacatgctgccaccatacatgcagtgctcatccggacatcttgtctgctcgaactgc
agaccaaagcttcagtgctgcccgacttgtcggggtccaactccttctgtccgcaacctg
ggcctcgagaagatcgccaacaccgtccgctttccatgcaaattctctacgtccggctgc
cccctgaacttccatcacgctgataagaccgagcacgaggagctctgcgaattccgaccc
tactgctgcccgtgccctggagctagctgcaagtggcagggaggcttgtcggatgtgatg
gagcatttgaagaagatccacaagagcatcacgacgcttcaaggcgaggatatcgtcttc
ctggccactgacatcaatcttcctggagcagttgactgggttatgatgcagagctgcttt
gactataattttatgttggtgctcgagaagcaggaaaagtacgatccagctcagccaact
cagatgttctacgcagtcgttcagctgattggctcgaagaaggaagctgataactttgtg
taccggcttgagctatcggcgagccgccggagaatgtcatgggaagccacaccgagaagc
atccacgagggggtggtagtggccattcaacagtcggattgcctagcgttcgattcaaat
gctgcacagctttttgcagaaaacggaaaccttggaatcaacgtcactattagccgaata
gatactccacagaggcgccacccaaatgagttggaaaattctgatctcgagtacgactag
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