Caenorhabditis elegans (nematode): CELE_Y39A1A.5
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Entry
CELE_Y39A1A.5 CDS
T00019
Symbol
rabx-5
Name
(RefSeq) Rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
CELE_Y39A1A.5 (rabx-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_Y39A1A.5 (rabx-5)
Membrane trafficking [BR:
cel04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
CELE_Y39A1A.5 (rabx-5)
Protein recycling
Other Rab GTPase associated proteins
CELE_Y39A1A.5 (rabx-5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CCAP
Se_S_carrier
ApoO
CATSPERB_1st
ANTH
Arch_fla_DE
Motif
Other DBs
NCBI-GeneID:
176481
NCBI-ProteinID:
NP_001360492
WormBase:
WBGene00012644
UniProt:
A0A486WY48
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Position
III:<10605349..>10614930
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AA seq
520 aa
AA seq
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MSDKHGEEDKKAKMHLKANDLLCVNGCGFYGTPQWENRCSKCWRAHQNEMKKCQDFAKNR
SLLSFDQFQERRKSTTESKSRGIKNLFKTSPIPEGGTSSPTSTSPASTPTRHSRRRELSP
DSLEARQQFTDFLVANLSTGMAQEIARSVKNAVNKISEMRMSSDDMSELVMSYYQYLGER
IGGHSLFDSPDCKVKVEDVMDQVEKYISTFCYSIFFCANHEEEVADMSLQDRIRSLHWVT
AGFLETKMVFKKQTVRDKIDEAISELIEINAKRSAFEKLDCLTKSCKAIFEALKESEAST
SADEFLPTLIYVLFRGNPPLIQSNVKFISRFAIPARLMSGEAAYFFTNLSCALEFARNMN
HESLQMEKSEFEAYTSGHLAPPLSVINSACNQAIYVLEGTIETITNVAKKAGSLAKNLTN
MHGKSDDDLEKMLAVIKETVDFYPTDEYMNMKQSIFAEEKETADILVSLSRQSSESGRGT
LTDTQPSTPQPDTSLESPLIAEIQAINLTSSGNQEHVEEA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataagcatggcgaggaggacaagaaagcaaaaatgcatttaaaagctaatgat
ttattatgtgtcaatggatgcggattctacgggaccccacagtgggagaatcgttgctca
aaatgttggagagctcatcagaatgagatgaaaaaatgtcaggattttgcgaagaataga
tctcttctaagtttcgatcaattccaagagcggcgtaaatcgacaacagaaagcaagtca
cgtggcatcaaaaatctgtttaaaacgtctccgattccagaaggcggaaccagttcacca
acttccacgtcaccggcgagcacaccaactcgtcattccagacgtcgagaactctccccg
gattctctggaagcccgtcaacaattcaccgattttctcgtagcgaatctctcaacagga
atggctcaagaaattgctcgttcagtgaaaaacgcggtgaataagatctcagaaatgaga
atgagctcagatgatatgtcagaacttgtaatgagttattatcaatatcttggagaacga
atcggtggacattcgttatttgattcaccggattgtaaagttaaagtggaagatgtgatg
gaccaagtggaaaagtatatatcaacattttgttattcaatattcttttgtgcaaatcat
gaagaagaagtagctgatatgtcgttgcaagaccgtattcgatcacttcactgggttact
gctggatttctggaaactaagatggtttttaagaaacaaacggttcgagataaaattgat
gaagctatttcggaacttattgagattaatgcaaaacgatctgcatttgagaagcttgat
tgtttgacgaaatcttgtaaggcgatttttgaggcgcttaaggagagtgaagcttcaaca
tcggctgacgaattcctgccaacactaatatacgttttattccgtggaaatccgccgtta
attcaatcaaatgtcaaatttatatcaagatttgcaattccagcgaggcttatgagtgga
gaagctgcctatttcttcacgaatctctcctgtgccctcgaatttgccagaaacatgaat
cacgagagtcttcaaatggaaaaatctgaattcgaagcctacacatctggacatttggct
ccaccactctcagttatcaattcagcatgtaatcaggcaatttatgtacttgaaggaact
attgagactataacaaatgttgcaaaaaaggcgggaagtctcgcgaaaaacttgacgaat
atgcatggaaaatctgatgatgatctcgaaaaaatgctcgcggtgatcaaggagactgtc
gatttctacccgactgatgaatatatgaacatgaaacaatctattttcgccgaagaaaaa
gaaactgccgatattctcgtatcactgtcccgtcaatcatctgaatctggtcgtggaact
cttacagacactcaaccatcaactccacaacctgatacatctctagaatctcccctaatt
gcagagattcaagcaattaatctgacttcttctggaaatcaagagcatgtagaagaagct
tag
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integrated database retrieval system
