Caenorhabditis elegans (nematode): CELE_Y39B6A.36
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Entry
CELE_Y39B6A.36 CDS
T00019
Symbol
gtf-2F2
Name
(RefSeq) General transcription factor IIF subunit 2
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CELE_Y39B6A.36 (gtf-2F2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_Y39B6A.36 (gtf-2F2)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CELE_Y39B6A.36 (gtf-2F2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Mnd1
Motif
Other DBs
NCBI-GeneID:
180243
NCBI-ProteinID:
NP_741661
WormBase:
WBGene00012694
Ensembl:
WBGene00012694
UniProt:
Q8MYM8
LinkDB
All DBs
Position
V:18993940..18998200
Genome browser
AA seq
263 aa
AA seq
DB search
MSPTKRYSNDVDCELAKRSIWLVKVPRYLSELWDANEGNVVGKLQIGAQVELHTAKGLIH
PKPKEPTEGSSSTVTQPEASEIPTEYSFILHDVKSQTMSVLSEDKQGLGADAPIKTGKLA
IEGRIIKKAECRPPATSKYMKMKLAHIVKNTQPKKTVKMIEKAAVKFKPVSVHAEDMIKS
KQKKDGAKTYRADRDVLRGALFKAFEKHSFYRLQDLQQLLQQPVSYVKEVLQEIAVYNTA
PPHKSLWCLKPEYCNYKVNAQSE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagcccaacgaagcgatattcgaatgacgtcgactgtgagctggcaaaacggagcatt
tggcttgtaaaagtgcccagatatttgtcagagctctgggatgccaacgagggaaatgtt
gttggaaaattgcagattggagcgcaggtcgagcttcacaccgccaaaggtctcattcat
cccaaaccaaaagagcccacagagggctcatcatctacagtaacccaaccagaagcctcg
gaaattccaacagaatactcatttattcttcatgacgtcaaatctcaaacaatgagcgtt
ttatccgaagataagcagggactcggtgcagatgctccaatcaaaactggaaaactggca
attgagggacgaattatcaaaaaagcggaatgtcggccaccggccacgtcgaaatatatg
aaaatgaagttggcacatattgtgaaaaatactcaaccaaagaaaacggttaaaatgatt
gaaaaagcggctgtgaagtttaagcccgtgtctgtacatgctgaagatatgattaagagc
aaacagaagaaggatggagctaaaacttatcgagctgatagagatgtgctccgtggagct
cttttcaaagcttttgagaagcatagtttttatagacttcaagatcttcagcaactcctt
caacaaccggtcagctacgtcaaagaagtgctccaagagattgccgtctacaatactgct
ccaccgcacaagtctctgtggtgcctgaaaccggaatactgtaactacaaagtcaacgca
caatcggaataa
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integrated database retrieval system
