Caenorhabditis elegans (nematode): CELE_Y41G9A.1
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Entry
CELE_Y41G9A.1 CDS
T00019
Symbol
osm-5
Name
(RefSeq) Intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cel03037
]
CELE_Y41G9A.1 (osm-5)
Cilium and associated proteins [BR:
cel03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
CELE_Y41G9A.1 (osm-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_6
TPR_12
TPR_8
TPR_19
TPR_7
TPR_11
ANAPC3
TPR_17
TPR_Slam
ARM_TT21_5th
TPR_CcmH_CycH
TPR_15
HrpB1_HrpK
ARM_TT21_N
ARM_TT21_2nd
DUF2989
NatA_aux_su
TPR_21
HAT_PRP39_C
Wzy_C_2
Endopep_inhib
DUF1672
Motif
Other DBs
NCBI-GeneID:
180585
NCBI-ProteinID:
NP_508511
WormBase:
WBGene00003885
Ensembl:
WBGene00003885
UniProt:
G5ED37
LinkDB
All DBs
Position
X:2984263..2991478
Genome browser
AA seq
820 aa
AA seq
DB search
MANSTFREDDDDFYGGFDSYDKAYDIQNITQNPQFQQAVARSSHGRRPTASQMGFRDASS
SYGKPPGTMMGNQSRMGGRTAMANNNEPARPMTAVRGAGYTSFANKVQAAERPLSTENSG
ENGEEKCRQMENKVMEMLRESMLASEKKKFKEALDKAKEAGRRERAVVKHREQQGLVEMM
NLDLTFTVLFNLAQQYEANDMTNEALNTYEIIVRNKMFPNSGRLKVNIGNIHFRKREFTK
ALKYYRMALDQVPSIQKDTRIKILNNIGVTFVRMGSYDDAISTFDHCVEENPNFITALNL
ILVAFCIQDAEKMREAFVKMIDIPGFPDDDYMKEKDDDDVLLNQTLNSDMLKNWEKRNKS
DAEKAIITAVKIISPVIAPDYAIGYEWCLESLKQSVHAPLAIELEMTKAGELMKNGDIEG
AIEVLKVFNSQDSKTASAAANNLCMLRFLQGGRRLVDAQQYADQALSIDRYNAHAQVNQG
NIAYMNGDLDKALNNYREALNNDASCVQALFNIGLTAKAQGNLEQALEFFYKLHGILLNN
VQVLVQLASIYESLEDSAQAIELYSQANSLVPNDPAILSKLADLYDQEGDKSQAFQCHYD
SYRYFPSNLETVEWLASYYLETQFSEKSINYLEKAALMQPNVSKWQMMIASCLRRTGNYQ
RAFELYRQIHRKFPQDLDCLKFLVRIAGDLGMTEYKEYKDKLEKAEKINQLRLQRESDSS
QGKRHSANSTHSLPPSGLTGLGSGSGGSSGGGTRQYSAHVPLLLDSGTPFTVAQRDMKAE
DFSYDDPVAISSRPKTGTRKTTTDTNIDDFGDFDDSLLPD
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagcacttttcgtgaagatgatgacgatttttacggcggttttgattcgtat
gataaagcatatgatattcagaacataactcaaaatccacaatttcaacaagccgttgct
aggtcgagccatggaaggcgtccgactgcatctcaaatgggattccgagatgcttcctcc
tcttatggaaaaccgccgggaacgatgatgggaaatcaaagtcgaatgggcggtcgaaca
gccatggctaacaacaatgaacctgcgagaccgatgaccgctgtccgcggagccggatat
acatcctttgcaaataaagttcaagccgcagaaagaccactaagtaccgagaactcgggt
gaaaatggtgaagaaaaatgtcggcagatggaaaacaaagtaatggaaatgctccgagaa
agtatgctggctagtgagaagaaaaagttcaaagaagcgctggataaagcgaaggaagct
gggcgacgtgaaagagcagttgtgaagcacagggagcaacagggattggtagagatgatg
aatttggatctaactttcaccgtgttgttcaacttggctcagcaatatgaagcgaatgat
atgactaatgaagcgctaaacacttatgaaatcattgtaaggaacaaaatgttcccaaat
tctgggagactaaaggttaatattggaaatattcatttccgcaaacgtgaattcacaaaa
gctttgaaatactacaggatggctttagatcaagttccgagtattcaaaaagatacaaga
attaaaattctcaacaatattggtgtaacttttgtcagaatgggaagttatgacgatgcc
ataagcacttttgatcattgtgtggaagaaaatccgaattttattacagccctcaacttg
atattggtagcattttgcatacaagacgcagaaaaaatgagagaagcatttgtgaaaatg
attgatattcctgggtttccggatgatgactacatgaaagagaaagatgatgatgatgtt
ttgttgaatcagaccttgaactcggatatgctgaaaaactgggagaaacggaacaagtcg
gatgctgaaaaagcaatcattactgcagtgaagattattagcccggttattgctcctgac
tacgctatcggctatgaatggtgccttgaatctctcaagcagtctgtacacgcaccattg
gcaattgaacttgaaatgacaaaagctggtgagctgatgaaaaacggagatattgaggga
gcaatcgaagtgctgaaagtttttaattcgcaagattccaaaacagccagtgcggctgca
aacaatctttgtatgctgagatttttgcaaggaggacgccgtctagtagatgcacagcaa
tatgctgaccaggcactttcaattgaccgctataatgcgcatgctcaagtcaaccaaggc
aacattgcgtacatgaacggcgatttggacaaagctttgaataattatcgagaggcgttg
aacaatgacgctagttgtgttcaagcattgttcaatattggactaactgcaaaagcgcaa
ggcaacctggagcaggcacttgaatttttctacaaacttcatggaatccttctgaataat
gtacaagtgctagtgcaattggcttctatatacgagtcattggaagattctgcacaagca
atcgagctgtatagtcaggcaaacagtttggttccaaatgaccctgcaatcctttccaag
ctggcggatttgtatgatcaagaaggtgacaagtctcaagcattccaatgtcattatgac
agctatcgatattttccatcaaacctggaaaccgttgaatggctggcttcttattattta
gaaactcagttttctgagaaatccatcaactacttggagaaggctgccctgatgcagcca
aacgtttcaaaatggcaaatgatgatagccagttgcctacgacggacaggcaattaccaa
agagctttcgagctttatcgtcagattcatcgcaagttccctcaagacctcgactgcctc
aaattcttggttcgaattgccggtgatcttggaatgacggaatacaaggagtacaaggat
aaactggaaaaggctgaaaaaatcaatcaactccgtctacaacgggaaagtgattcaagc
caaggaaaacgtcactctgcaaattcaacgcattcccttcccccatccggcctgaccggt
ttgggatcggggtcaggtggttcgagtggtggtggcacccgtcaatacagtgcacatgtt
cctcttttgctggatagtggcaccccgttcacggtggcccaacgagatatgaaagctgaa
gatttctcctatgatgatcctgttgcaatatccagccgcccaaaaacaggcacgcgcaaa
actacaacagacaccaacattgatgattttggagactttgatgacagccttttgccagat
tga
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