Caenorhabditis elegans (nematode): CELE_Y42H9AR.3
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Entry
CELE_Y42H9AR.3 CDS
T00019
Symbol
rabs-5
Name
(RefSeq) FYVE-type domain-containing protein
KO
K12481
rabenosyn-5
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CELE_Y42H9AR.3 (rabs-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_Y42H9AR.3 (rabs-5)
Membrane trafficking [BR:
cel04131
]
Exocytosis
Others
Others
CELE_Y42H9AR.3 (rabs-5)
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
CELE_Y42H9AR.3 (rabs-5)
Protein recycling
Rab4 associated proteins
CELE_Y42H9AR.3 (rabs-5)
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
CELE_Y42H9AR.3 (rabs-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
Rbsn
zf-Di19
zinc_ribbon_9
zf-C2H2_4
FYVE_2
Motif
Other DBs
NCBI-GeneID:
177603
NCBI-ProteinID:
NP_501352
WormBase:
WBGene00021538
Ensembl:
WBGene00021538
UniProt:
Q9N3Y4
LinkDB
All DBs
Position
IV:complement(8104284..8107602)
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AA seq
563 aa
AA seq
DB search
MIGATGSGGTGGHNDVVRQGFICPFCMEDFGEYERLICHVENDHPEEDSSDLAGMFVSNV
KGFFDKAKRGIQKLDAKKSIADLASNVETEFTETTEKLVERAPLPRIPKPLPPDEILPGT
RRSKTREFLSTRELNINEVAVRTNMLIIRLDRLINGGPKDKDPVKRKEFEREVVPWLDDA
EAVCCPLCASRFGLTRRRHHCRLCGRVLCHSCSKFLSFDTAKTLTSSSNPLGDTHIIVEE
PNTVENEQELLQPEENGRRSFFSLSQKSMDKMKRAMAGAVQKVHSAATGEEIIAGALNEQ
DLSEHMRVCNLCLRDLHFRESQMDKKEPPEFVQQYDLMKVMIEEVKNLVPTYVRVVTSLK
NGESVYSHKHGEELRSKCLEIQKSIDYVSKKIAEGANDKPNSAKEQQLRKNIRLYAVQAL
QGLIGQMESLPTAEECSNLIIKRKERRAKDFARVNRTVMKMSSSMPQLQEQHSHLNSTSS
VSSFGGPSSIDDGWSAEDNDLVFEPSSIEDDTIQTDHPLYEQREQLRKFLFQASATGKLD
EMDILERNLKEIEEEMMRLGLSC
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgattggagcaactggttcaggtggaacaggaggacataatgatgtggttagacagggt
ttcatctgtccattttgtatggaagactttggagaatacgaacgactcatttgccacgtg
gaaaatgatcatccggaagaagatagcagtgatttggctggaatgtttgtgtcaaatgtt
aagggattttttgataaagctaagcgaggaattcagaaattggatgcgaagaaaagtatc
gcagatctcgcaagtaatgtcgaaacagaattcactgaaactactgaaaagcttgtcgaa
agagcacctcttccaagaattccaaaacctcttcctcctgatgaaattttaccgggaact
cggagatcaaaaacgagagaattcttatcaacaagagaattaaatataaatgaagtggct
gttcgaacgaatatgcttattatcaggcttgataggcttattaatggaggaccaaaggat
aaggatccagttaaaagaaaagaatttgaacgagaagttgttccatggttagatgatgct
gaagcagtatgttgtccattgtgtgcttctcgattcggtctcactagacgacgtcatcac
tgtagattgtgtggaagggttctttgtcattcgtgtagcaaatttctttcgtttgacact
gcaaaaacactcacaagttcttcaaatcctctcggggacacccatataattgttgaagag
ccgaatactgtagaaaatgaacaagaacttctacaaccggaagaaaatggacgtagatca
tttttctcgttatctcaaaaatcgatggataagatgaaacgagcaatggctggagctgtt
caaaaagttcattctgcagcaactggagaggaaattatagcaggtgcactaaatgaacaa
gatctttctgaacatatgagagtttgtaatctatgccttcgagatttacatttccgagaa
agtcaaatggataaaaaagaaccgccagaatttgtacaacaatatgatctaatgaaagta
atgattgaggaagtgaagaatcttgtgccaacttatgttcgagttgtcaccagtttgaaa
aatggtgaatctgtatatagtcataaacatggtgaagaattacgatcgaaatgtctagaa
attcaaaagagtatagattatgttagcaagaaaatagcggaaggagcaaatgataaaccg
aattctgcaaaagagcaacaattaagaaagaatattcgattatatgcagtccaagctctt
caaggtcttattggtcaaatggaatccctaccaacagccgaagaatgctcgaatctgata
ataaaaagaaaagaaagacgagctaaggattttgcaagagtaaacagaactgtgatgaag
atgtcaagttcaatgccacaactacaggaacaacattcacacttaaacagtacaagcagt
gtatcttcatttggaggcccatcatcgattgacgatggatggagtgcggaagataatgat
ctagtattcgagccgagttcaatcgaagatgatacaatacaaacggatcatcccttgtat
gagcaacgagaacaacttcggaagtttttatttcaagcatcagcaacaggaaaactcgat
gagatggacatcttggagagaaatctcaaggaaattgaagaagagatgatgcgtcttgga
ctttcatgttaa
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integrated database retrieval system
