Caenorhabditis elegans (nematode): CELE_Y45F10D.7
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Entry
CELE_Y45F10D.7 CDS
T00019
Symbol
Y45F10D.7
Name
(RefSeq) WD_REPEATS_REGION domain-containing protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CELE_Y45F10D.7 (Y45F10D.7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_Y45F10D.7 (Y45F10D.7)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CELE_Y45F10D.7 (Y45F10D.7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
WD40
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
BBS2_Mid
Beta-prop_LRRK2
PEP5_VPS11_N
Beta-prop_Vps41
eIF2A
KNTC1_N
Beta-prop_NWD2_C
Beta-prop_WDR19_2nd
Beta-prop_HPS5
Cytochrom_D1
Beta-prop_IFT122_2nd
B-prop_COPA_B_2nd
Beta-prop_EIPR1
WD40_CFAP43
SKA2
Beta-prop_KIB1-4
RAB3GAP2_N
VPS11_N
DUF5562
Motif
Other DBs
NCBI-GeneID:
178346
NCBI-ProteinID:
NP_001369795
WormBase:
WBGene00012887
Ensembl:
WBGene00012887
LinkDB
All DBs
Position
IV:13789081..13796224
Genome browser
AA seq
924 aa
AA seq
DB search
MKRIQSELFAPYRFLGVVTGDVAPSIRSTFVAKKSALSVLCPIDNVIMQYNGKKLRAIGM
SEPLSDKVSAVASSSTSVFAAHGTNITSLAFCRDIKDSIDLGAKIKIMTLIGTQLIAVDI
SSGIHVIDTSEGGLQMSLLMEGSDDFEITAICHPSTYLNKIVVGSSTGRMKIINFRTGKV
IHEFQRSFDSRITIIEQTTALDVVVVGLENGEVMLFNVKMDKIITSFRHDAKITNVAFRD
DGESTMVTADKNGTMAVWDLEKQELIGKITGIHSDEINCLYFVPGEPIMLSASLDNSLRL
WIFDSADGMPRELVRLEGHSKPCASIKFVGKDHVLSAGKDGSIRKYDVSSLTMRQKLGTV
GQGVKLNKEVQNVAEMAFGWQREAAWNNVFCRQVNDTKITTWQTRNNTSGAFTLEHDRFK
KKVDFIDANATALCVSPCGNFVFIGYSTGHIDQFNAQSGRHVHSFTASTTVKKSKKSKNP
RKGPTKTNGDIHNDTPAADSPITSLSVDQRGKELMSTDAQGHILFWSLSTKAINAKMFKK
DVRLGICAPCPSNSLVALVAIAENGKESVILVDTVCHRVARAFETVGNKVNAMTFSSDGK
WLLVADNDSYIRVFDVATSQLIDVLLFSKPCISMSYNETGQYLATVHEGERAVYTWANKV
LFVAHINIRAHPADYLPSWSMISTEEGGTCDIDDDEDDLTTLMDQDIKAMKELQIDENLV
TFSGLPSSRWANLPDLALIKERNKPTDAVKKIKQAPFFLSASATLDGFEFETENIGDEMD
GDSRYITSKRNLLELESSFTTLLRNAKTRDHLLDAFKTLQNMSLSAIDFQIRTLNPKTIP
IFFRMLLEVLKTKTNFELVQAYAATATKIHRTIMWNASEGASEHEELTEVLEEMAQVQME
SWNEMENLFVENMAVVQWIKNALL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcatccagtcggagctctttgctccttatcgattcttgggtgtggtaaccggt
gatgtcgccccgtcaattcgttcaacatttgtcgcaaaaaagtcggcattgtcagttttg
tgcccaattgataatgtaatcatgcaatacaatggaaaaaagcttcgtgcgattggaatg
tcggaacctttaagcgataaagtgtcagcagtcgcgtcttctagcacgagcgtgttcgct
gctcacggaaccaacattacttctctagcattctgcagagatatcaaagattccatcgac
ttgggcgccaagatcaaaatcatgacattaatcggaactcagctgatcgcagttgatatt
tcttctggaatccacgtcattgatacatcagaaggaggccttcaaatgagcctattgatg
gaaggatccgacgattttgaaataacggcaatctgtcacccatccacgtatttgaataaa
atcgtggtcggcagtagcactggtcgaatgaaaattatcaatttccgaactggaaaagtg
attcatgagttccagcgaagtttcgactcgagaatcacaattatcgagcaaactactgcc
ttagatgtggtagttgtagggctggaaaatggtgaagtgatgcttttcaatgtgaaaatg
gataagatcatcacatcgttccgacatgacgcaaagatcactaatgtcgcttttcgtgac
gacggcgaatcaacaatggtaactgccgataagaacggaacaatggctgtgtgggatctc
gagaagcaggaattaatcggaaaaatcacgggaattcactctgacgagattaattgtctc
tattttgttccaggggagcctatcatgctctccgcttcactggataactctctgcgtctc
tggattttcgacagtgcagatggaatgccacgtgaacttgtccgcctggaaggacactcg
aaaccatgtgccagtatcaaatttgttggaaaagatcacgttttgtcggccggaaaagat
ggatccattcgaaaatacgatgtttcttcgttgacaatgagacagaagcttggcacagtt
ggacagggtgttaaattgaataaagaagttcaaaatgtagctgaaatggcgtttggatgg
caacgagaagctgcatggaataatgtgttttgcagacaagtaaatgacacaaaaatcacc
acatggcaaacgagaaacaacacctctggagcatttacactggagcatgatcgtttcaag
aaaaaagtggattttattgatgcaaatgcgactgctctctgcgtatcaccttgtggaaat
ttcgtatttattggatattctacaggtcatatcgatcaatttaatgctcaaagtggccgc
cacgttcattcatttactgcttccaccactgtgaaaaagagcaagaagtctaagaatcca
cgaaaaggtcccactaaaaccaacggcgatattcacaacgacactccggctgccgattct
ccgattacatcgctttccgtagatcaacgtggaaaagagctaatgagcactgatgctcaa
ggtcatattctgttctggtctctttcaacgaaggctatcaatgcgaaaatgttcaaaaaa
gatgttagattgggaatttgtgcaccgtgcccgtcgaatagtttagtggcgttggtggcg
attgctgagaatgggaaagaaagtgtgattctagtggatacagtgtgtcatcgagttgct
agagcatttgagactgttggcaataaggtcaacgcgatgacattctcatcagacggaaaa
tggcttctagtcgctgacaatgattcttatatccgtgtctttgatgttgccacttctcaa
ctaatcgatgtacttctcttctcaaaaccatgcatttcaatgtcctacaatgaaacaggc
caatacttggctacagttcatgaaggagaacgggccgtctatacatgggccaacaaggtt
ctattcgtagctcacatcaatattcgagcacatccagctgactacttaccatcttggagc
atgatttctacggaagagggcgggacttgtgatattgacgatgatgaggatgatttgacg
acgcttatggatcaagatattaaagcgatgaaagaattgcaaattgatgagaatcttgtt
acattctcaggacttccatcatctcgttgggctaatcttccagatttggcacttattaaa
gagcgaaataagccaactgatgctgttaaaaagatcaaacaagctccattctttctgtcg
gcgtctgccactttggatggatttgaatttgaaactgagaatattggagacgaaatggac
ggagattccagatatattacatcgaagaggaatttgttggagttggagagctcatttact
actctgctcagaaacgccaaaacccgagatcatcttcttgacgccttcaaaactcttcaa
aatatgagtctatcggctatcgatttccaaattcggactctgaatccgaaaacgattccg
attttctttagaatgttgttggaggttctcaaaacaaagaccaactttgaactggttcag
gcctacgcggccacggccacaaaaatccatcgaacaattatgtggaatgcatcagaagga
gcatcggagcatgaagagctcacagaagttctcgaagaaatggctcaagtacaaatggaa
agttggaatgagatggaaaacctatttgttgagaatatggcagttgttcagtggattaaa
aatgcattgctttga
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