Caenorhabditis elegans (nematode): CELE_Y46G5A.30
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Entry
CELE_Y46G5A.30 CDS
T00019
Symbol
snf-5
Name
(RefSeq) Sodium-dependent transporter snf-5
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
CELE_Y46G5A.30 (snf-5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cel02000
]
CELE_Y46G5A.30 (snf-5)
Transporters [BR:
cel02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
CELE_Y46G5A.30 (snf-5)
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Gene cluster
GFIT
Motif
Pfam:
SNF
LMBR1
Motif
Other DBs
NCBI-GeneID:
174923
NCBI-ProteinID:
NP_496735
WormBase:
WBGene00004904
Ensembl:
WBGene00004904
UniProt:
G5EBM5
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Position
II:complement(12861963..12865785)
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AA seq
728 aa
AA seq
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MADSGSNEEAMKRQAPSVKFDSPSKPDPQQVSQQSNQLSSQKSIQQSTQSKIDPSRIDTK
NTTVTTTRPTLDTPPEEEEEKRDGFGNSFEFVLTSLGLAVGLGNIWRFPTRAYNNGGSAF
LIPYLTCAFLFGLPAVYFEFLTGQYQGKSPPVIFRRVRPILEGVGWMGVFVAALVAIYYI
VIVSWISIYMINICRGHFALWSHCNNDWNNGTSCITMADQYLCKNHTKVMANSTLWNSSL
PIPDKMVYFNGACQDANGTDVSTATEQYFMTYIVQPSSGMLDFGGFNWPVFAAMSVCWLL
TGLGILKGAKIMGKISYVSVLVPYVLVVVLFINGVFQDGSGVGLEMYFGTPNYTKLYEQD
TWTEALKQLCFSLSVGHGGLISLSSYSPKRNNIFRDALIVIIGDTTMSLVGGGAVFATLG
YLAKATGQDVKDVVKSGLSLAFVVYPEAMTRMPVPWLWCFIFFLMLFLLGASTEIALVDV
FCSCIYDQYPRFRNRKWIVVIAWCSVLYCIGLVFSTRAGYYWFEMFDEYAAGFSSVCTVV
CELLVMMYIYGFRNVRDDITEVVGHARNKFTGAIGAHSWYFTANWMVISPSIALILVGLS
FVREYPYMGRHDIYPAVFDIFGWFLSFLPVIIVPIFMLLNFIRCRNRGHSYRTLFMLQKQ
HASYRRIAANYSKDQLALQDQLPDKEPWDEENVDLTDSESESRNAASGDVPIDDVATIDT
SSTYHQVY
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcgggcagcaatgaagaggcaatgaaacgccaagcaccatccgtaaaattt
gattccccatcaaaaccagatccacaacaagtgagccaacaatcaaaccaactatcaagc
caaaaatcgattcaacaatccactcaaagcaagatagatcccagccgaattgacaccaag
aacaccacagtcaccaccactcgtccgacccttgacactccaccagaagaagaagaagag
aaacgtgatggcttcggaaactcgttcgaattcgtcctaaccagcctgggtctggccgtt
ggtcttggaaacatttggagattcccgacaagagcctataacaacggtggatccgcattc
ctgattccatatctcacctgtgcgtttctcttcggccttccagctgtctactttgagttt
ttgactggacaatatcaagggaaatcgccaccggtgatctttcgcagagttcggccaatt
cttgaaggtgtcggatggatgggtgtattcgtggcggcactcgtcgcgatttactacatt
gtgattgtatcgtggatcagcatctacatgatcaacatttgtcgcggacattttgcactg
tggagtcattgtaacaacgattggaataatggtacatcgtgtattacgatggcagaccaa
tacttgtgcaaaaatcacaccaaagtgatggcgaactcaactttgtggaatagtagcctc
ccgatccctgataaaatggtttacttcaatggagcatgccaagatgctaacgggacagat
gtcagtactgctaccgagcaatattttatgacttacatcgtgcaaccttcatcgggtatg
ctggattttggtggtttcaattggcctgtgtttgccgccatgtcggtgtgctggctgctg
actggtttgggaattctgaaaggcgccaagattatgggaaagatctcctatgtatctgta
cttgtgccgtatgtacttgtcgttgtgctttttatcaatggagtttttcaggatgggtct
ggcgtcggattggagatgtactttggaactccaaactacacaaaactttacgaacaagac
acatggactgaagcactgaaacagctctgcttctcactatcagttggccatggtggactg
atcagtctctcctcgtacagtccaaaacgcaataacatattccgagatgcgttgattgtg
atcatcggagacacgacaatgtcgcttgtgggtggtggtgccgtctttgcgactcttggc
tatctggcgaaagctactggtcaggatgtcaaggatgtggtgaagagtggattgtcgctg
gcgttcgttgtgtatcccgaggcaatgacccggatgcctgttccatggctctggtgtttc
atcttcttcctgatgcttttcctgctcggagcgagtaccgagatcgcgttggttgatgtg
ttctgctcgtgcatctacgatcagtacccgagattcagaaatcgcaagtggattgtggtg
attgcatggtgttcggtactctactgtattggattggtattttctacgagagccggatat
tactggttcgagatgtttgacgagtatgctgctggcttctcgtcagtgtgcactgttgtc
tgtgagctactggtcatgatgtacatctacggattccgcaacgttcgagacgatattacg
gaagttgttggtcacgccagaaacaagttcaccggtgctatcggagctcactcttggtat
tttaccgctaactggatggtgatctctccgagcattgcgctgattctcgttggtctctcg
ttcgtacgcgagtacccatatatgggaagacatgatatctacccggctgtctttgatatt
ttcggatggttcctctcgttcctcccggtcatcattgtgccgatctttatgcttctcaac
tttatccgctgccgcaatcgaggacatagctatcgcacattgttcatgctccaaaagcag
cacgcgtcgtaccgaagaatcgctgcaaactacagcaaagatcagcttgcgcttcaagat
caactacccgacaaggaaccttgggatgaggaaaacgttgatttgaccgattcggagtct
gagagccgtaacgctgcgagtggtgatgtgccgattgatgatgtggcaactattgataca
agctctacatatcatcaagtttattaa
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