KEGG   Caenorhabditis elegans (nematode): CELE_Y53F4B.28
Entry
CELE_Y53F4B.28    CDS       T00019                                 
Symbol
ptr-20
Name
(RefSeq) SSD domain-containing protein
Organism
cel  Caenorhabditis elegans (nematode)
SSDB
Motif
Pfam: Patched Sterol-sensing ACR_tran Lum_binding
Other DBs
NCBI-GeneID: 175165
NCBI-ProteinID: NP_497114
WormBase: WBGene00004234
Ensembl: WBGene00004234
UniProt: Q9NAB5
LinkDB
Position
II:15158180..15163614
AA seq 860 aa
MRKLERFFDWYGQFVARKPFFFILIPSLLTILSTYGFLSFHTQDDIWDIYAPTNGLSRVE
EAGIKRFEYASGSHHHRMQILVSKKNRGNILTNEALGEVSQAHKFVADNITAFDGTRHIA
YKNLCGVYCNDSNAAVLAFLQATLNDTSRSSFKLTFPNAEALQKKIFVGYSLGDLKIEKG
YVTEAKMVVLHYMVDTSIPNGRALATDFENKVRAFFASISDLSHHIKYSVLSRTRELEEQ
RAITITSLPFLGLTIVVLTCFMLVTLVRFPLYTSQHWQSIVGVLSPGMALWTTTGLLWGI
GYPFSNILTVVPFLVVTIGIDDAFLILAGWRQSTKGESLEVRLGQSVAISGASVTVTSVT
DVACFATGLFSNMPVVQLFCLYTTVALAIDFIYQMTFFTALVGIFVRKQVDIEKELVKNE
PKIEKTKEEEGASSSSLASLLTFVPTISQEAHTRSILEVFIDFLHTPVAKLAVVLAFIGH
ILICLALVSHVNTNFDMENLYLEDSPLTDISRRMQNFVLGEAFVVNFGVYPMPDFDDEQI
RLKFEEMVKSLETMPKYGAGKENTNLWIREYSNAVAFWGETEDFWHKEDMVNNYREYGMD
EKYVTMTNDTNGDEIIDGFFFTITYRNFTNFLEVESFLEDRRDILKNYSTYFKVFSHHPF
EKVPTESAASAPFNFISTSVSAVVLMSLLVLVFIMNFEAIISVAVSIVSICLGIVVYLHL
WNVNLDAVSLISMLMSIGFSVDYSAHVCYHYFAHVHEDEQLWRSHNYAETRDRLLSTFRG
VAWPVMQSGLSTILGMFPLMFVRAYVVAVFWKTVILVGILGMLHALILLPVIFILTHDIK
LLFRRKRAVAPTPHSMELAS
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgcgaaaattggaacgatttttcgactggtatgggcaatttgtggcaaggaaaccgttc
ttttttattctaataccctcattactcacaattctctcgacatatggatttctatcattt
cacactcaagacgacatttgggacatttatgcaccgacaaatggtctatcaagagtagaa
gaagccggaattaagaggttcgagtatgcatcgggatctcatcatcatcgaatgcaaata
ttggtgtccaagaagaatcggggcaacattttgaccaatgaagcactcggtgaagtttcg
caggctcataagtttgtcgctgacaacatcactgccttcgacggaacccgccacatcgcc
tacaaaaacttgtgtggagtatactgtaacgacagtaacgcagcagttctcgcattcctc
caagccactctcaatgacacttcaagaagctctttcaagttgacattcccaaatgctgaa
gctcttcagaagaaaatattcgtcggttattcccttggagatttaaagattgaaaagggt
tatgtgacagaggccaagatggttgtactgcattatatggtggatacatcgattccgaat
gggagagctcttgccactgactttgagaataaagttcgggcattcttcgcgtcgatttcc
gacctatcacatcatatcaagtactcagtgctttcacggacaagggaactggaggagcaa
agagccatcacaattacctctctacccttccttggcctaacaatcgttgtgctcacgtgt
ttcatgttggtgactcttgttcgattcccattatacaccagtcagcattggcagagtatt
gttggagtcttatcccccggaatggctctatggacaactaccggtttgctatggggtatt
gggtacccattcagtaacattctaacagttgtgccatttttggtggtaactattggaatt
gatgatgcatttttgattttggccggatggagacagtccacaaaaggagaatcacttgaa
gtgcgactaggccagtctgtagcaatttctggagcctccgtgacagtcacttcagttaca
gatgtggcctgctttgccactggcttgttctccaacatgccagttgtacagctcttctgt
ctatacacaacagttgctctagccattgattttatatatcagatgacctttttcacggct
ttagttggcatttttgtgaggaaacaagtggatattgagaaggaattggtgaagaatgag
ccaaaaatcgagaaaactaaggaagaagaaggcgcttcatcttcgtcgttggcctcactt
ctcacatttgtgccgacgatttctcaggaggctcataccagaagtattctagaggttttc
atcgatttcttgcatactccagtggcaaaacttgcggtggttttggcatttattgggcat
attttgatctgccttgccctcgtctctcatgtcaacacaaattttgacatggaaaacctg
tatctggaagactctccgctcaccgacatctcccgtcgcatgcagaatttcgtgttgggc
gaggcgtttgtcgtaaactttggggtttatccgatgccagattttgatgatgagcaaatt
cggttgaagtttgaggagatggtaaagagcctggagacaatgccaaaatatggagcaggc
aaggagaacacgaatttgtggataagagaatattctaatgcagtcgccttctggggtgaa
actgaagacttctggcacaaagaggatatggttaacaactatagggaatatggaatggac
gagaaatatgtcactatgacaaatgacacgaatggcgatgaaattatcgatggattcttc
ttcacaattacctatcgcaatttcaccaatttcctggaagtcgagtcgtttttggaggac
cgtcgggatattttgaagaattattcgacctatttcaaagtattttcacatcatccattt
gaaaaagttcccacggaaagtgcagcttcagccccattcaactttatatccacgtcagta
tccgccgtcgtactaatgtcccttctagtgttggtatttatcatgaatttcgaggcaatt
atttctgtagcagtgtcaattgtatcaatatgtctcggaatagttgtgtacctccattta
tggaatgtgaatctcgatgcagtttcactgatatctatgctaatgtcaattggattttcc
gtggactattcggctcatgtttgctatcactactttgctcatgtgcatgaggatgagcaa
ctctggagatcacataactacgccgagactcgtgaccgtcttctaagcaccttccgcgga
gtcgcctggccagtaatgcagtccgggctctccacgattcttggcatgttcccattgatg
tttgtacgtgcgtatgttgtagcagtattctggaagactgtgatcctggtcggtatactt
ggaatgcttcatgctctcattctgttgccagtaatattcattttaacgcatgacattaag
ctcttattccgacggaaacgtgcagttgctcctactccgcattcgatggaattggcttca
tag

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