Caenorhabditis elegans (nematode): CELE_Y53F4B.28
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Entry
CELE_Y53F4B.28 CDS
T00019
Symbol
ptr-20
Name
(RefSeq) SSD domain-containing protein
Organism
cel
Caenorhabditis elegans (nematode)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
ACR_tran
Lum_binding
Motif
Other DBs
NCBI-GeneID:
175165
NCBI-ProteinID:
NP_497114
WormBase:
WBGene00004234
Ensembl:
WBGene00004234
UniProt:
Q9NAB5
LinkDB
All DBs
Position
II:15158180..15163614
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AA seq
860 aa
AA seq
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MRKLERFFDWYGQFVARKPFFFILIPSLLTILSTYGFLSFHTQDDIWDIYAPTNGLSRVE
EAGIKRFEYASGSHHHRMQILVSKKNRGNILTNEALGEVSQAHKFVADNITAFDGTRHIA
YKNLCGVYCNDSNAAVLAFLQATLNDTSRSSFKLTFPNAEALQKKIFVGYSLGDLKIEKG
YVTEAKMVVLHYMVDTSIPNGRALATDFENKVRAFFASISDLSHHIKYSVLSRTRELEEQ
RAITITSLPFLGLTIVVLTCFMLVTLVRFPLYTSQHWQSIVGVLSPGMALWTTTGLLWGI
GYPFSNILTVVPFLVVTIGIDDAFLILAGWRQSTKGESLEVRLGQSVAISGASVTVTSVT
DVACFATGLFSNMPVVQLFCLYTTVALAIDFIYQMTFFTALVGIFVRKQVDIEKELVKNE
PKIEKTKEEEGASSSSLASLLTFVPTISQEAHTRSILEVFIDFLHTPVAKLAVVLAFIGH
ILICLALVSHVNTNFDMENLYLEDSPLTDISRRMQNFVLGEAFVVNFGVYPMPDFDDEQI
RLKFEEMVKSLETMPKYGAGKENTNLWIREYSNAVAFWGETEDFWHKEDMVNNYREYGMD
EKYVTMTNDTNGDEIIDGFFFTITYRNFTNFLEVESFLEDRRDILKNYSTYFKVFSHHPF
EKVPTESAASAPFNFISTSVSAVVLMSLLVLVFIMNFEAIISVAVSIVSICLGIVVYLHL
WNVNLDAVSLISMLMSIGFSVDYSAHVCYHYFAHVHEDEQLWRSHNYAETRDRLLSTFRG
VAWPVMQSGLSTILGMFPLMFVRAYVVAVFWKTVILVGILGMLHALILLPVIFILTHDIK
LLFRRKRAVAPTPHSMELAS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaattggaacgatttttcgactggtatgggcaatttgtggcaaggaaaccgttc
ttttttattctaataccctcattactcacaattctctcgacatatggatttctatcattt
cacactcaagacgacatttgggacatttatgcaccgacaaatggtctatcaagagtagaa
gaagccggaattaagaggttcgagtatgcatcgggatctcatcatcatcgaatgcaaata
ttggtgtccaagaagaatcggggcaacattttgaccaatgaagcactcggtgaagtttcg
caggctcataagtttgtcgctgacaacatcactgccttcgacggaacccgccacatcgcc
tacaaaaacttgtgtggagtatactgtaacgacagtaacgcagcagttctcgcattcctc
caagccactctcaatgacacttcaagaagctctttcaagttgacattcccaaatgctgaa
gctcttcagaagaaaatattcgtcggttattcccttggagatttaaagattgaaaagggt
tatgtgacagaggccaagatggttgtactgcattatatggtggatacatcgattccgaat
gggagagctcttgccactgactttgagaataaagttcgggcattcttcgcgtcgatttcc
gacctatcacatcatatcaagtactcagtgctttcacggacaagggaactggaggagcaa
agagccatcacaattacctctctacccttccttggcctaacaatcgttgtgctcacgtgt
ttcatgttggtgactcttgttcgattcccattatacaccagtcagcattggcagagtatt
gttggagtcttatcccccggaatggctctatggacaactaccggtttgctatggggtatt
gggtacccattcagtaacattctaacagttgtgccatttttggtggtaactattggaatt
gatgatgcatttttgattttggccggatggagacagtccacaaaaggagaatcacttgaa
gtgcgactaggccagtctgtagcaatttctggagcctccgtgacagtcacttcagttaca
gatgtggcctgctttgccactggcttgttctccaacatgccagttgtacagctcttctgt
ctatacacaacagttgctctagccattgattttatatatcagatgacctttttcacggct
ttagttggcatttttgtgaggaaacaagtggatattgagaaggaattggtgaagaatgag
ccaaaaatcgagaaaactaaggaagaagaaggcgcttcatcttcgtcgttggcctcactt
ctcacatttgtgccgacgatttctcaggaggctcataccagaagtattctagaggttttc
atcgatttcttgcatactccagtggcaaaacttgcggtggttttggcatttattgggcat
attttgatctgccttgccctcgtctctcatgtcaacacaaattttgacatggaaaacctg
tatctggaagactctccgctcaccgacatctcccgtcgcatgcagaatttcgtgttgggc
gaggcgtttgtcgtaaactttggggtttatccgatgccagattttgatgatgagcaaatt
cggttgaagtttgaggagatggtaaagagcctggagacaatgccaaaatatggagcaggc
aaggagaacacgaatttgtggataagagaatattctaatgcagtcgccttctggggtgaa
actgaagacttctggcacaaagaggatatggttaacaactatagggaatatggaatggac
gagaaatatgtcactatgacaaatgacacgaatggcgatgaaattatcgatggattcttc
ttcacaattacctatcgcaatttcaccaatttcctggaagtcgagtcgtttttggaggac
cgtcgggatattttgaagaattattcgacctatttcaaagtattttcacatcatccattt
gaaaaagttcccacggaaagtgcagcttcagccccattcaactttatatccacgtcagta
tccgccgtcgtactaatgtcccttctagtgttggtatttatcatgaatttcgaggcaatt
atttctgtagcagtgtcaattgtatcaatatgtctcggaatagttgtgtacctccattta
tggaatgtgaatctcgatgcagtttcactgatatctatgctaatgtcaattggattttcc
gtggactattcggctcatgtttgctatcactactttgctcatgtgcatgaggatgagcaa
ctctggagatcacataactacgccgagactcgtgaccgtcttctaagcaccttccgcgga
gtcgcctggccagtaatgcagtccgggctctccacgattcttggcatgttcccattgatg
tttgtacgtgcgtatgttgtagcagtattctggaagactgtgatcctggtcggtatactt
ggaatgcttcatgctctcattctgttgccagtaatattcattttaacgcatgacattaag
ctcttattccgacggaaacgtgcagttgctcctactccgcattcgatggaattggcttca
tag
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