Caenorhabditis elegans (nematode): CELE_Y54E2A.4
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Entry
CELE_Y54E2A.4 CDS
T00019
Symbol
Y54E2A.4
Name
(RefSeq) SEC63 domain-containing protein
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_Y54E2A.4 (Y54E2A.4)
Enzymes [BR:
cel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CELE_Y54E2A.4 (Y54E2A.4)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CELE_Y54E2A.4 (Y54E2A.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
ResIII
Helicase_C
AAA_22
DUF5814
Motif
Other DBs
NCBI-GeneID:
190256
NCBI-ProteinID:
NP_001293535
WormBase:
WBGene00013189
Ensembl:
WBGene00013189
UniProt:
U4PQS1
LinkDB
All DBs
Position
II:<14754622..>14778149
Genome browser
AA seq
1299 aa
AA seq
DB search
MLVHQNPIESQFYARLHDNLNAEVALGTVSTVDEGVEWLTYTYMYTRALKNPMAYGIAYN
AIERDPNLRDHFGNVIREAAMQLDQNKMIRFDMATEYLNSTDLGRIASNFYVKYETIQLL
NEAEKGVGLPVTFTSFMPDDMVIGLISMSTEFANLKCREEEIGDLEELMSYGCMMNVRGG
GLASVAGKVNVLLQSLISRTSTRNSALMSEQLYVQQNAGRLCRAMFEMVLKNGWSQAANA
FLGIAKCVEKQMWMNQCALRQFIQIINIPITWIEKIERKKARESDLLELSAKDLGYMFSC
DGDRLYTYLRYLPRMDVQAKFKPITYTIVQVEVTLTPTFIWNDQIHGKSGQQSFYLVLEN
LNENLIIHQERIGIGKMKVNRQETQNLVFTIPIVDCQLTNNFQLRLASEYFVTDDVVVPM
SLHNCILPKSFKSHTDLLDLEPLPIKTLKNSKFEAIYNFDYFNPIQAQVFFCLYKTDKSA
LIGAPTGSGKTLCAELAMFRLLQDHPGMKVVYIAPLKSLVRERVDDWKKKFEDGMGYRVV
EVSGDVTPDPEELAASSILITTPEKWDGISRSWATREYVRRVGLIVLDEVHLLGVDRGAV
LEAIVSRLKMITRRSHVTEEPVRLLGLSTALANAGDVAEWLGIPDEACYNFRPSVRPVPI
SVHIQGFPGQHYCPRMGLMNKPAYKAILTYSPRKPVLIFVSSRRQTRLTALAFVNLLIAD
HNPKQWLNMDMLELEDLMAAIKDENLKLTLPFGIGMHHAGLSAHERAIVEQLFIEKKIQV
LIATATLAWGINCPAHLVIVKGTEYFDGKKGKYVDFPVTDVLQMMGRAGRPQFDDSAVAV
IYVQDAKKTFYKKFLYEPFPVESSLLPVLPNHVNAEISAGTIDSKQAIVEYLSKTYLYRR
LFANPNYYGLEEDSEEAMLKFITKIVDDSVAELLASECIHVDSEQDVIKPTPCGRIASVY
YLQHETVRFLVKSLHSGCSVENMLKILTDVPEYAEIPVRHNEDLINTELQKKLRIRFSTS
VMGTSACKAHLLFQAHFMRTVLPTDYRTDLKSVLDQCIRILQAMREMARLKNWLSATMNI
ILLQQMCHSARWHDDHPLLCLPHLSHEDARSIGDGMTIPQLQNHLEIEKSTSLDDAKLAR
RAQKLFRECTKLDEAQSREVLKALCNWPIINMKIMQLVDSRGNCVDIDETKKPVKVTAGE
VYKLRIVMERVGPGKNNSSMHLPQWPKPKQAGWIIVVGNVSADMILNTTTVTGSHSTRST
AKLDIRAPATKGNHELAVLILSDCYLGIDQEYTLRLDVC
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttcaccaaaacccgattgaaagtcaattctacgctcggcttcacgataatttg
aacgctgaagtggccctgggtaccgtatccacagtggatgagggtgttgaatggttgacc
tatacctacatgtacacgagagccctgaaaaatccgatggcttatggaattgcgtataat
gcaattgaacgggatccgaatttgagagatcattttggaaatgtgattcgcgaggcggcg
atgcaactggatcagaataaaatgattcgatttgatatggcaaccgaatacctaaactcg
acggatctcggtcgaatcgcctccaatttctatgtcaaatacgaaacaattcagctcctc
aacgaagcggaaaagggcgtcggattaccagtaactttcacaagtttcatgccagacgac
atggtcatcggactcatctcaatgtccaccgagttcgcgaatttgaagtgtcgtgaggag
gagatcggcgatctggaagagctgatgagctacggatgtatgatgaacgttcgtggtggt
ggtctggcgagtgtcgccggaaaagtcaatgttctccttcaatcactgatctctagaaca
tcgacgagaaactcggcgctcatgtccgagcagctatacgttcagcagaacgccggtcgg
ctctgcagagctatgtttgagatggttctgaagaacgggtggagccaggcggccaatgcc
tttttgggaattgcaaaatgtgtcgagaagcagatgtggatgaatcagtgcgcgttgcgg
cagtttattcagatcatcaacatccccatcacatggatcgagaaaatcgagcgtaaaaaa
gcgagagaatcggatttactcgagctctccgccaaagatctcggctacatgttcagttgc
gacggtgaccgcctatacacctacctacgctaccttccgaggatggatgtgcaagcaaag
ttcaagccgatcacctacacgatcgttcaggtcgaggtcacactcacgccgacgttcatc
tggaacgaccagatccacggaaagtcgggacaacaatcgttctatctagtgctggagaat
ctcaacgagaatcttatcatccatcaggagagaatcggcatcgggaagatgaaggtgaac
cggcaggagactcagaatctagttttcactattccaatcgtcgactgtcagctgacgaac
aatttccaacttcgcctcgccagcgaatactttgtcaccgacgacgtggtggttccgatg
tctcttcacaattgcattctaccaaagtccttcaaaagccacacagatcttctggacctt
gagccacttcctatcaaaactctcaaaaactcaaagttcgaggcgatctacaactttgac
tatttcaacccaattcaagcgcaagttttcttttgcctgtacaaaaccgacaaaagcgca
ttgatcggagcgccgacaggatctggaaagacactttgcgcggagctcgccatgttccgc
ctgcttcaggaccatcctggcatgaaagtcgtgtacattgctccgttgaagtccttggtc
cgagagcgagttgacgattggaagaagaagttcgaagatggaatgggatatcgagtggtc
gaggtgtctggggatgtgactccagatcccgaggagcttgcggcttcctcaattcttatt
acgacaccagaaaagtgggatggaatctccagaagttgggctacgagggaatacgtccga
cgagtcggccttatcgtgctcgacgaggttcacctactcggcgtagatcgtggagctgtg
ctcgaggccatcgtcagcagactgaaaatgatcaccagaagaagccacgtgacagaggag
cctgtcaggttgctgggtctttccacagcgctcgccaacgcaggagacgtcgcagagtgg
cttggcatccccgacgaggcgtgctacaacttccgaccttcagttcgaccagtgccgatt
tcagttcatattcaaggattcccaggccaacattactgcccacgaatgggactgatgaac
aagccggcttacaaggcaattctgacctattccccaaggaagcctgtgttgatcttcgtc
tcgtctagacgacaaacccgcctgacagcgctcgcctttgtcaatttgctcattgccgac
cacaatccgaagcaatggctcaacatggacatgctcgagttggaagatctcatggccgca
atcaaggatgaaaatctcaagttgacactaccattcggaatcggaatgcatcacgctgga
ctcagcgctcacgagcgagccattgtggagcaattgtttatcgaaaagaagattcaagtg
ctcatcgcgactgccacattggcgtggggaatcaattgccccgctcatttagttattgtc
aagggaaccgaatatttcgacggaaagaagggaaaatacgtggattttcccgttacagac
gttctccaaatgatgggccgcgccggacgcccacaattcgacgattcggccgttgccgtg
atctacgtacaggacgcgaaaaagacgttctataagaagttcctctacgaaccgttcccc
gtcgagtcctcgctccttccagtgctgccgaatcacgtgaacgccgagatttccgccgga
acaatcgattcgaagcaggcgatcgtcgagtatttgtcgaaaacctatctctacaggcga
ttgtttgcgaatcccaattattacggtctggaggaggattccgaggaggcgatgctcaag
tttatcacgaaaatcgttgatgactctgtcgcagagctcctagcttccgagtgtatccac
gtggattccgaacaggacgtgatcaagccgacgccgtgtggaaggatagcttcggtgtac
tatcttcagcacgagaccgtccgttttctagtaaaatctctacattctggatgctcggtg
gagaatatgctgaagatcctgaccgatgttcccgagtacgcggagattcctgtccgccac
aacgaggatctcatcaatacggaacttcagaagaagcttcgcatccgattctcgacgtct
gtgatgggcacgtctgcgtgcaaagcccacctgctcttccaggctcatttcatgcggact
gtgctcccgacggattaccggactgatttgaagagtgtgctggatcagtgcattcggatt
ttgcaggcgatgcgtgaaatggctaggctcaagaattggctcagcgcaacgatgaacatt
attctgttgcagcagatgtgccattcggcaaggtggcacgacgatcatccattgctctgc
ctacctcatctctcccacgaggatgctcgttcaatcggcgatggaatgacaattccacag
cttcaaaaccatctggaaatcgagaaatccacgtcattagacgacgcgaaacttgctcga
cgagcccagaaactcttcagagagtgcaccaagttagatgaagctcaaagccgggaagtg
ctgaaagctctgtgcaattggccaattatcaacatgaaaatcatgcaattagtggattcc
cgcggtaattgtgtagatattgatgagacgaagaaaccggtgaaagtgacggctggcgag
gtgtacaaattgagaattgtcatggaacgagtcggaccgggaaagaacaactcatcaatg
catcttccacaatggccaaaaccaaaacaggctggatggataattgttgtgggaaacgtg
tcggccgacatgattcttaacacgactaccgtaaccggctcacattcgactcggtcgacc
gccaaattggatattcgtgcgccggcgacgaaaggaaaccacgagctcgccgtcctaatt
ctcagcgattgctatttgggaatcgatcaggagtacactttgcgattggatgtctgctga
DBGET
integrated database retrieval system
