KEGG   Caenorhabditis elegans (nematode): CELE_Y55B1AL.3
Entry
CELE_Y55B1AL.3    CDS       T00019                                 
Symbol
helq-1
Name
(RefSeq) Helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cel03400]
    CELE_Y55B1AL.3 (helq-1)
Enzymes [BR:cel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CELE_Y55B1AL.3 (helq-1)
DNA repair and recombination proteins [BR:cel03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    CELE_Y55B1AL.3 (helq-1)
SSDB
Motif
Pfam: DEAD POLQ_helical Helicase_C HTH_61 ResIII DUF4332 HHH_5
Other DBs
NCBI-GeneID: 175210
NCBI-ProteinID: NP_001022911
WormBase: WBGene00021905
Ensembl: WBGene00021905
UniProt: H2KY86
LinkDB
Position
III:complement(577684..587109)
AA seq 923 aa
MNRTPIRRCKSAEIEEDPFSPIPKFSRLRTPRTSREYVCPLKSTSPQSPSSSTENEPPPV
SVTSPPARKRALEESTVTPIQQKIGPPVLKRSSLSKLADGFRTAAYLNNESENDDDPFGL
SFRNEQVLMSKCAPAPEKRPETLTLDPSKCLPERDMEMYRKIKKLDKFYDWQQECLSDKR
LLDGENCILSLPTGAGKTLIAEVLMLREAIVRKRNAILVLPYVAIVQEKISALAPFEDAF
GINIEEYASNKGRFPPIKRRKRVSVYVATIEKANMLINSLITQGQLDRVGMVVVDELHMI
GDGGRGAILEQLLAKFLYKGTGQIVGMSATLPNIDDLKFALRAFVYSTNFRPVELTEFVK
IGQTMHQVSENGDLNPAGDLPTNNLKSTDPDGICQLLAKLIPKNSAVIFCPNKKNCENVA
VLIAKTLPAHIRQAKRAESDAFLQSYLSDNDDERMDAVLKQCILSGVAYHHSGLTQDERK
CVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKAPMVGRERLGKAQYLQMAGRAGRAGF
DTKGDCITIIKAGEEERWFREMLKSDIPRCMSSLSSEESMGSFILDCVVLKLAENIEEIM
TAVRYSLFYAQESPENIRKLVESSVKRLEEHYFITIEPLEQDVASEPSAQASSIPRVPGK
ISPSDLGNAVFNAGFDPDEATRLHADLVSSLNQGVIFASHFHLLFIITPYEQVCNINWDL
FLLMYNALPSSERKLLAECGLEEKFILEAIITRVDLTAGTPRMRLYIALMLQKIWNHEPM
YTVAERFGVEKGWLQATLQSSISQAASIAKFSEKITTMWPLRKLLPELVQRLSEAAQPEL
LPLMTVDGIKKARAAILFKAGYKTVGMIARANPLKLVQELGTIRMAQANSIIASARMVLR
DQVDEKMEELDVWGVATDSFNYF
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgaaccgtacaccgatacgaaggtgcaaatctgcagaaatagaggaagatccgttttcg
cctattccaaaattttcacgattacgaacgcctcgaacatctcgagaatacgtatgtcca
ctaaaatccacatcaccacaatccccatcatcatcgactgaaaatgagccgccgcccgtc
tccgttacatcaccacctgcgagaaaacgggcacttgaggaatccacggtgaccccgata
caacagaaaatagggccgcctgtgcttaaacggagttctttgagcaaattggccgatgga
tttcggacagctgcatatttgaataatgaaagtgaaaatgacgatgatccatttggatta
tcatttcgaaatgagcaagttttgatgtcaaaatgtgctccagcaccagaaaaaaggcct
gaaacactgacgctggatccatcaaaatgcctaccagaacgtgatatggaaatgtacaga
aagatcaaaaaattggataaattttacgattggcaacaagaatgtctctccgacaaacga
ctactcgatggagaaaactgtattctttccctgcctaccggagctggaaaaacgctaatt
gctgaagttttgatgctacgagaagctattgttcggaagagaaacgctattttagtgctc
ccatatgtagctatagttcaggaaaagatatcagcgttggctccattcgaagacgcattt
ggcataaatatcgaagaatatgcatcgaataaaggaagatttccgccgataaaacgtcga
aaacgagtatcagtctacgtggcaaccattgaaaaagccaatatgctcataaattctctc
attactcaaggacaactggatcgagttggaatggtcgttgtggatgagttacatatgatt
ggagatggtggaagaggcgcaattttagaacagttactggcgaaatttctgtacaaaggc
accggccaaatagtgggaatgtcagctactttgccgaatattgatgacctgaaattcgcg
ttgagagcttttgtgtatagcaccaatttccgaccggtagaactcacggaattcgtaaaa
atcgggcaaacgatgcaccaagtttctgaaaacggagatctgaaccccgctggggatctc
cctacaaataatctaaaatcaactgatccagatggaatttgccagctgctcgccaagctc
attcccaaaaattcggccgtaattttctgtccgaacaagaagaattgtgagaatgtggct
gttttaattgcgaaaactcttccagcacatattcgacaagctaaaagagctgaaagtgat
gcatttctgcagtcctacttgtcggataacgatgatgaacggatggatgctgtgctgaaa
cagtgtattctgtcaggagtggcctatcatcattcggggttaacacaagatgagcgaaaa
tgtgttgaggctgcatttatggaaggcctaatctacgtggtttgcgcaacgtccacactg
gcagcaggcgtgaaccttcccgtccgtcgtgtcatcataaaagcaccaatggttggaaga
gaacgtctcggcaaagcacaatacctccaaatggccggaagagctggacgtgccggattc
gatacaaaaggagactgtattacaattataaaagccggcgaagaggagagatggttcagg
gaaatgctgaaatcagatattccaagatgtatgagctcattgtcaagtgaagagtcaatg
ggatcgtttattttggattgtgtagtgctgaaattggctgaaaatattgaagaaataatg
acagccgttcgatattcactgttttatgctcaagaatcaccggaaaacattcgaaaactg
gttgaatcatcagtgaaaaggcttgaagaacactattttattactattgagcctctggag
caagatgtggcttcagagccttctgcgcaagcgtcaagtattcctcgagtaccaggaaaa
atctcaccatcggaccttggaaatgcagtcttcaatgcgggtttcgacccggacgaagcg
actcgtctgcacgctgacctcgtttcttccctaaatcaaggagtcatttttgcgtcgcat
tttcatttattattcattattacaccttatgaacaagtgtgtaatattaattgggatcta
tttttgttaatgtacaacgccctcccgtcaagcgagcgaaaattgttggccgagtgtggt
ctcgaagagaaattcatactagaagccatcattacacgtgtcgatttgaccgccggtact
cctcgaatgcgactttacattgcgctgatgcttcaaaaaatctggaatcacgagccaatg
tatacggtagccgaacgatttggcgtggagaagggatggcttcaggcgacactgcagtca
tcgatttcacaggccgcgtcaattgctaaattttcagagaaaatcaccacgatgtggcct
ctacgaaaactacttcctgaacttgttcaacgactttctgaagctgcccagccggaactt
ttaccgttaatgacagttgatggaatcaagaaagcacgggccgcaattttattcaaagct
ggttataaaaccgttggaatgattgcaagagcaaatccactgaaactagttcaagagctc
ggcacaattcggatggctcaagcgaattcaatcatcgccagcgcacgaatggtactacgc
gatcaagttgatgagaaaatggaagaactcgacgtttggggcgtcgcaaccgatagtttt
aattatttttaa

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