Caenorhabditis elegans (nematode): CELE_Y55F3AM.12
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Entry
CELE_Y55F3AM.12 CDS
T00019
Symbol
dcap-1
Name
(RefSeq) mRNA-decapping enzyme 1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CELE_Y55F3AM.12 (dcap-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_Y55F3AM.12 (dcap-1)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CELE_Y55F3AM.12 (dcap-1)
mRNA degradation factors
5'-3' decay
Decapping complex
CELE_Y55F3AM.12 (dcap-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
176924
NCBI-ProteinID:
NP_500030
WormBase:
WBGene00021929
Ensembl:
WBGene00021929
UniProt:
Q9N363
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Position
IV:complement(1052524..1054794)
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AA seq
332 aa
AA seq
DB search
MSDAKKKAAAELAAKNLAQLQKIDIAASKILDKMPFAAIYHIDAARKEWNQSNCEGTFFV
YQRADRPYFSFLIANRNDPSDFIEPLTLNHILRHDGNFIYFYKDLASIQALWFHQIDDAQ
KIYNLLQKLVNRLKGSTTEQARAAKAASEAPQASVPAPTQAPAAPAQAPQMAPQAPPKVD
LLQLIKSAQNPPQKSAATIEQMPPMLQKLMLKEPGAAMSADELEKDLIKSAKPHRNHLLQ
EFTNSTSAISLAAVSTKPLHGSEGDVESDIAEGEILEPLDASFVVGSGEQTPVLNKEQFI
SAIAHLMQTDDEFVSQIHQAYVSALNRRLNID
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgctaaaaaaaaggccgccgccgagctagccgcgaaaaacctcgcacaactc
cagaaaatcgacatcgccgccagcaagattctcgacaagatgccatttgccgcgatttat
catatcgatgcggcgagaaaagagtggaatcagtcgaattgcgaaggaacatttttcgtc
tatcagagagctgatcggccatattttagtttcctcatcgcaaatcgcaacgatccatcg
gatttcatcgagccgctcaccctcaaccatattctccgccacgacggaaatttcatctac
ttttacaaggatttggcctcaattcaagcactatggttccaccagattgatgatgctcag
aaaatctacaatttgttgcaaaaactcgtgaatcgtctgaaaggaagcactacggagcag
gctcgggccgccaaggccgcctcggaggctccacaggcttcggttccggctccaacgcag
gctccagcagctccagctcaagctccacaaatggctcctcaagccccaccaaaagtggat
cttctccagctcataaaaagtgcgcaaaatccgccgcaaaaatctgcggcaacgatcgaa
caaatgccgccaatgctccagaagctgatgctcaaagagccgggagcagcaatgtcggcc
gatgagctcgagaaggatcttataaagtcggcaaaaccgcatcggaatcatcttttgcaa
gaatttactaactcaacgtcggcgatttcgttggcggcggtctcgacgaagcctttgcat
ggatcggagggtgatgtggagtcggatattgctgaaggagagattttagagccacttgat
gcttcatttgtcgttggaagtggtgaacagacgcctgttctcaataaagaacagttcatc
tcagcaatcgcccacctaatgcaaaccgacgacgaattcgtttcacagattcatcaagcc
tacgtcagtgcactcaatcggcgtctaaatatcgattaa
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integrated database retrieval system
