Caenorhabditis elegans (nematode): CELE_Y57A10A.25
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Entry
CELE_Y57A10A.25 CDS
T00019
Symbol
parn-2
Name
(RefSeq) CAF1 family ribonuclease
KO
K13202
target of EGR1 protein 1
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_Y57A10A.25 (parn-2)
Spliceosome [BR:
cel03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CELE_Y57A10A.25 (parn-2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
174866
NCBI-ProteinID:
NP_496602
WormBase:
WBGene00013265
Ensembl:
WBGene00013265
UniProt:
Q9NA76
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Position
II:complement(12251726..12256628)
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AA seq
490 aa
AA seq
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MSGDGDSSTTSSAGDGSTSKDKIPAFSEIRVIEVNRDNFAKIWPYLLVCIKSADFTAIDL
ELSGLGGKGLRSRDIAERYQAIRDAAHTRSILSVGIATMKLTHKSEKRRALRYETQVFNI
LTFSEKPFTIEPSALQFLAKHSFDFNRLIQSGVRFQGANCPLKTLFRELLGSSATFCLHN
GFIDLAFIYKQLYDIDLPDTLDGFVNNLSDMFPDNYLPVADSKYLAEYQTRMTASFLEYV
FRRTQGDNEIERQNNRYHIEICFPSSEKSIKALKNATESVDVRLPEGFPDHAIPIDLHIH
VCKYFAYHGFCHARNTEKGCKLLHDVDTAIDLQRIKENKKAFKRKRRYNNVIAESVAEKT
GTDEEAWKNAKFEQNLLTRDFRELKRNVVTGLHRAGVDAFMTAFAVIYQQRRTLMADNSV
DLKFLNRVPLSAKDKPLHLRHRPVPVPQSEQIDAHLEAMVEINKQRDYIRMNAAATVIKS
VQKEDTPCED
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgacggggactcatcaacgacaagctccgccggcgacggcagcacttcaaag
gacaaaattccggcgttctcagaaattcgagttatcgaagtaaaccgcgacaatttcgcg
aaaatctggccatatttgcttgtttgcatcaaatccgcagattttacagcgatagatttg
gagttgagcggtctcggcgggaaaggactacgttcacgtgatatcgctgagagatatcag
gcgattcgtgatgccgcgcatactagaagcattctatccgttggaatcgccacaatgaag
ctgacgcataaaagtgaaaaacgtcgagctcttcgctacgagacccaagttttcaatatt
ctcacattctcagaaaaaccattcacaattgaaccatcggctcttcaatttctcgccaaa
cattctttcgatttcaacagacttattcaatcaggagtacgattccagggagccaactgt
ccattgaaaactcttttccgtgagcttctaggctcatcggccaccttctgccttcacaat
ggatttattgatttggcatttatctataagcagttatatgatatcgatttacctgacact
cttgatggattcgttaataatttgagtgatatgtttccggataactatctgccggtggcg
gattccaagtatttggcagagtatcagacgagaatgactgcctcttttttggaatatgtg
ttccggagaacgcaaggagacaacgagatcgagcgtcaaaataatcgatatcacatcgaa
atttgcttcccaagctctgaaaagtcgataaaagctctaaaaaacgctacggaaagtgta
gatgtacgtcttccagaaggattcccagatcacgcgattcccatcgatcttcacatccac
gtgtgcaaatatttcgcgtatcacggcttctgccacgctcggaacactgaaaaaggatgt
aaactgctccatgacgtggatactgctatcgatttacagaggattaaggagaataagaag
gcgttcaaacgaaaacggagatataataatgtgattgctgaatcggttgccgagaagacg
ggcaccgatgaggaggcatggaagaacgcgaaatttgagcagaatttgttgactcgagac
tttcgggagctcaagagaaatgtggttacagggctgcatcgggctggagttgatgctttt
atgacggcttttgcggtgatttatcagcagagaagaaccctgatggctgataattcagtt
gatttgaagttcctaaaccgcgttccactgtccgccaaagataagccattgcatcttcgc
caccgaccggtcccagttccacaatccgagcaaattgatgctcatttggaggcaatggtg
gagatcaacaagcaacgggactatattcgaatgaatgcagccgctacagttatcaaaagt
gttcagaaagaggatacaccttgtgaagattga
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