Caenorhabditis elegans (nematode): CELE_Y67D2.6
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Entry
CELE_Y67D2.6 CDS
T00019
Symbol
ddx-35
Name
(RefSeq) putative ATP-dependent RNA helicase DHX35 homolog
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_Y67D2.6 (ddx-35)
Enzymes [BR:
cel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CELE_Y67D2.6 (ddx-35)
Spliceosome [BR:
cel03041
]
Complex C
Other components
Complex C specific factors
CELE_Y67D2.6 (ddx-35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
HA2_C
OB_NTP_bind
HA2_N
DEAD
AAA_22
ATPase
nSTAND3
ABC_tran
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
175308
NCBI-ProteinID:
NP_497420
WormBase:
WBGene00022056
Ensembl:
WBGene00022056
UniProt:
Q9BKQ8
LinkDB
All DBs
Position
III:complement(1544948..1554447)
Genome browser
AA seq
732 aa
AA seq
DB search
MSYHPGHGHRQEPRKGAGARRGFARPDDSADAPRTGPLIFEERSTENAGAAPPIEEQLKV
HNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWA
ADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLL
REILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKD
FFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDIL
VFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVA
TNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGK
CYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLE
LLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVF
ITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNV
RSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNM
YKGSSIMFKKDYPKWVIFTEVMQDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMRG
PAATSAAADDDY
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcacccgggacacggtcaccgtcaggagcccagaaaaggagccggagcccgt
cgtggttttgctcgaccggatgactctgcagacgctccacgtaccggaccactgattttc
gaggaacgatctaccgaaaacgcgggagcagctccgccgattgaagagcaactaaaagtg
cacaataatccatatgcttcattgaatattcaacagcagagaattagattacctattttt
aagaatcgcggtcacattctctacatgtgcgaacgatatcgtacaataatcattgtcggc
gaaacaggatgcggaaagagcactcaagtaccccaattccttctagaagccggttgggcg
gccgacggccgccaaatcgtcattactcagccacgaagggtggccgtggttacgttagcc
acccgagtcgccgaggagaaggactgtattttggggcacgacgttgggtatactgtaaga
tttgatgatgtatcggataaggatactaaagtcaaatttatgactgatgggctattgttg
agggagatccttgcagatccactattatcgaaatatagcattatcatgattgacgaggca
cacgaacggtcatgtaacacggatattttgctcgggttacttcgaaaaatcatacaaatt
cgcaatgatctgaggattattgtgtcctcggcgacgctggacgccgagctttttaaggat
tttttcgagatgaatgagacgggaaattcggataaagatactgctggaattatttcagtg
gagggaagaacacatccagttgcagtacatcatacaaaaacgtcagtgccagattactgt
caatcggcggtggatactgtaataaatattcacaaacacgagaatcctggcgatattctg
gtattcttgacaggacaagacgaggtggaagacgtttgtgagaagctccgcgagctggct
ggaaatttgaaaaattgcgaccgtctgtgggtggttccgtgctatggagcgcttcctgct
cgcgagcaaatgaaagccttcgactcaacaccccatggaacccgtaaagtggtcgttgca
accaacatagccgaagcatccatcacaattcccggcatctgctacgtcattgacactggc
tacgtgaagcttcgcgcccaacacgccgccaacggtgtggagaccctaatgcgggttact
gtatccaaagcatccgccgaacaacgtgccggacgtgccggacgtattcgacccggaaaa
tgctatcgcctgtacccggaatcggagtttgaacggttcgccgagggtacggtacccgaa
attcagcggtgccagatggcgagcacaattttgcagttgaaagctcttggtgtgcagaat
gtgcacagatttcactatttatcgccacccccgtcctgggcgatgatcaacggtttggag
cttctttacgcgcttggagcaatcgacgaaacatcccaactaacatccccattgggtcta
caaatggcagaatttccattaccaccaatgcacagtaaatgtctactgaaatccgccgaa
ttcgggtgctccacagaaatggtgacaattgttgcaatgatgcaaatccaggatgtcttt
attaccccatatcgtcaacgtcatcaagctgacgtcattcgaaagaaattcgcggtcgaa
gaaggagatcacatgacaatgctcaatgttttcacgaaattcgtcgaaaatggccgcagc
aagaagtggtgctccgatcattttgtgaattatcgggggcttatgagggcggataatgtg
cggagccaacttgtcaggctgttgaagagatttgagattgagaaagtttcaagtcgcggg
cttattaattgctctgaaaacatccgacaatgccttgtaaccggcttcttctcccaggcg
gcccaatatcactacacagggaaatatatgacagtcaaggagagcttccccttcaatatg
tacaaaggatcgtcgattatgttcaagaaagactatccgaaatgggtaatcttcaccgaa
gtgatgcaggattcgatccgtgacgtcacagttattgagcctgaatggctttacgaattg
gctccacactattacgaatttggcaccgaaggagagctcgccgagaagagaatgaggggt
cctgctgccacctccgccgccgctgacgatgattattaa
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