Caenorhabditis elegans (nematode): CELE_Y92H12BL.1
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Entry
CELE_Y92H12BL.1 CDS
T00019
Symbol
Y92H12BL.1
Name
(RefSeq) Threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cel03016
]
CELE_Y92H12BL.1 (Y92H12BL.1)
Enzymes [BR:
cel01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
CELE_Y92H12BL.1 (Y92H12BL.1)
Transfer RNA biogenesis [BR:
cel03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
CELE_Y92H12BL.1 (Y92H12BL.1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
190786
NCBI-ProteinID:
NP_740783
WormBase:
WBGene00022363
Ensembl:
WBGene00022363
UniProt:
Q8MXQ7
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Position
I:<1348503..>1359643
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AA seq
425 aa
AA seq
DB search
MAGCVSQAAPSEPWLQNVSIVGVKQIDRIVEVVGETLKGNKVRLLTRNRPDAVLSLPKMR
KNELIEVLSISTGCLNNCTYCKTKMARGDLVSYPLADLVEQARAAFHDEGVKELWLTSED
LGAWGRDIGLVLPDLLRELVKVIPDGSMMRLGMTNPPYILDHLEEIAEILNHPKVYAFLH
IPVQSASDAVLNDMKREYSRRHFEQIADYMIANVPNIYIATDMILAFPTETLEDFEESME
LVRKYKFPSLFINQYYPRSGTPAARLKKIDTVEARKRTAAMSELFRSYTRYTDERIGELH
RVLVTEVAADKLHGVGHNKSYEQILVPLEYCKMGEWIEVRVTAVTKFSMISKPASIQEDQ
QPLSLMHLFPLAVFCLVLITLYSVDRFLYPGFFEEWLPFLADAHHDEQQAEMWEHHDNSD
PVFYE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctggatgtgtgtcacaggcggcaccaagtgaaccgtggcttcagaatgtttcgatt
gttggtgttaagcagattgatcgaattgttgaagttgttggcgagacgttgaagggcaat
aaggtgcgcctgctcaccagaaaccgtccggacgccgttctaagccttccaaaaatgcga
aaaaacgagctaatcgaagtgctctccatctccaccggttgccttaacaattgcacatat
tgcaagacaaaaatggctcgaggagatcttgtcagttatccgttggctgatttagttgaa
caagcaagagcagcatttcatgatgaaggagttaaagagctatggttgacatcagaagat
cttggtgcatggggaagagatattggattagttttgccggatttattgagagaattggtc
aaagtgattccggatggaagtatgatgagattgggaatgactaatccaccatatattttg
gatcatttggaggaaatcgcagaaatcctgaatcatccgaaagtgtacgctttcctgcat
attccggtgcaaagtgcctcagatgctgtgctcaacgacatgaaacgagaatattcacga
cgacattttgaacaaattgccgattatatgattgcgaatgtccccaacatctacatcgcc
acagacatgattctcgcattcccgaccgaaactttggaagatttcgaagaaagtatggaa
cttgtccggaaatacaaattcccatctctattcatcaatcaatattatccgagaagcggt
actccggccgcacggctcaaaaaaatcgatacggttgaagcgagaaaacggacggccgca
atgtctgaattgttcaggtcgtacacaagatatactgacgaacgaatcggagaacttcat
cgtgttcttgtgacggaagttgcggcggacaaacttcacggagttggccataacaagagc
tacgagcagattctcgttcccctcgagtactgtaaaatgggagaatggatcgaagtccgg
gtgactgctgtgaccaaattcagtatgatctctaagcccgcgtcgattcaggaagatcag
cagccgctgagccttatgcacctcttcccacttgcagtattctgcctcgtactcatcact
ctctactcggtcgatcgattcttgtacccgggattctttgaagaatggcttccgttcttg
gctgatgctcatcatgatgagcagcaggccgagatgtgggagcaccacgacaactcggat
cccgttttttatgaataa
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