Caenorhabditis elegans (nematode): CELE_ZK328.5
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Entry
CELE_ZK328.5 CDS
T00019
Symbol
npp-10
Name
(RefSeq) Nuclear pore complex protein Nup98
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CELE_ZK328.5 (npp-10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_ZK328.5 (npp-10)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_ZK328.5 (npp-10)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CELE_ZK328.5 (npp-10)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CELE_ZK328.5 (npp-10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
175852
NCBI-ProteinID:
NP_001254934
WormBase:
WBGene00003796
UniProt:
G5EEH9
LinkDB
All DBs
Position
III:complement(6013447..6019562)
Genome browser
AA seq
983 aa
AA seq
DB search
MFGQNKSFGSSSFGGGSSGSGLFGQNNQNNQNKGLFGQPANNSGTTGLFGAAQNKPAGSI
FGAASNTSSIFGSPQQPQNNQSSLFGGGQNNANRSIFGSTSSAAPASSSLFGNNANNTGT
SSIFGSNNNAPSGGGLFGASASTVSGTTVKFEPPISSDTMMRNGTTQTISTKHMCISAMS
KYDGKSIEELRVEDYIANRKAPGTGTTSTGGGLFGASNTTNQAGSSGLFGSSNAQQKTSL
FGGASTSSPFGGNTSTANTGSSLFGNNNANTSAASGSLFGAKPAGSSLFGSTATTGASTF
GQTTGSSLFGNQQPQTNTGGSLFGNTQNQNQSGSLFGNTGTTGTGLFGQAQQQPQQQSSG
FSFGGAPAATNAFGQPAAANTGGSLFGNTSTANTGSSLFGAKPATSTGFTFGATQPTTTN
AFGSTNTGGGLFGNNAAKPGGLFGNTTNTGTGGGLFGSQPQASSGGLFGSNTQATQPLNT
GFGNLAQPQIVMQQQVAPVPVIGVTADVLQMQANMKSLKSQLTNAPYGDSPLLKYNANPE
IDGKSSPASTQRQLRFLAAKKGALSSSSDAQDSSFIIPPISKVMSDLSPAVTRSADVTKD
LNYTSKEAPPSLARGLRNSTFNPNMSLTNRSVHESSALDKTIDSALDASMNGTSNRLGVR
GSVRRSNLKQLDMSLLADSSRVGRESRVADPDALPRISESERRQDVVTSTPAVDPVQAVI
QRHNDRNRDPPSLNLDTTCDEHTGLEPVSAATSSAASVVSTPSEETVNVNSAAGVKLTKP
DYFSLPTINEMKNMIKNGRVVLEDGLTVGRSSYGSVYWPGRVELKDVALDEIVVFRHREV
TVYPNEEEKAPEGQELNRPAEVTLERVWYTDKKTKKEVRDVVKLSEIGWREHLERQTIRM
GAAFKDFRAETGSWVFRVDHFSKYGLADDDEPMDGSPPQQALQASSPLQVIDMNTSARDV
NNQVQRKKVHKATDAHHQEVRFE
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgttcggccagaacaaatcattcggctcatcgagttttggcggtggcagctctgggagc
ggtctatttggacaaaacaaccagaacaatcaaaacaaaggattgtttggtcagccagcc
aataacagtggaactactggccttttcggggcggcacagaacaagccggcaggatcaatc
ttcggagcggccagcaacacttccagcatattcggaagtccgcagcagcctcagaacaac
cagagttcattgttcggtggagggcagaacaatgccaacagaagtatctttgggtcaact
tcttcagcagctcccgcaagcagttccctattcggtaacaacgctaacaatactggaacc
agcagcatttttggttccaataataatgcaccatctggtggaggtctctttggagcttca
gcatcgaccgtatctggaaccactgttaagtttgagccaccgatcagttctgatactatg
atgagaaatgggacaactcagacaatttccacgaagcacatgtgcatttctgcaatgtcg
aagtacgatggaaagagtattgaagagctccgagtggaggattacattgcaaatagaaag
gctcccggaacaggaacgacttccactggcggtgggctttttggagcatccaacacaaca
aaccaagctggaagcagtgggctttttggatcaagtaatgctcaacagaagacttctctg
ttcgggggagcttcgacgtcatctccatttggtgggaacacgagcacagcaaacactgga
agttcattgttcggtaacaacaacgccaacacgtctgctgcaagtggatctcttttcgga
gctaaaccagcgggctcgtcactgttcggatctacagctacaacaggagcttcaacattc
ggtcagacaactggatcgtctcttttcggcaatcaacaaccacagacgaatactggtgga
tcgttgttcgggaatacacagaatcaaaatcaatctgggtccctgttcggcaacacgggg
acgactggtaccggactcttcggccaagctcagcaacaaccacagcaacaatcgagtgga
ttcagtttcggaggtgccccagcggcgacaaatgctttcggtcagccggctgctgcaaac
accggtggaagtctcttcggaaatacttcgacagccaatactggcagttcgttatttggt
gcgaagcctgcaacaagtaccggcttcacatttggagccactcagccaacaactacaaat
gccttcggttccacaaataccggaggtggattgtttggaaacaatgcagcaaagccaggt
ggtttgttcggaaatacgacgaatactggaacaggcggcggtctctttggttcccagcca
caagcttcttcaggaggactgtttggttcaaacactcaagctacacagccgttgaatact
ggattcggaaatcttgctcaaccgcaaattgtaatgcaacaacaagtggccccggtacct
gtgattggcgttacggctgatgtcctccagatgcaagcaaacatgaagtcattgaagtcg
cagttgacaaatgcgccgtatggtgattcaccactactcaaatacaatgcgaatccagaa
attgatgggaagtcttcgccggctagtactcaacgacagctgagattccttgctgcgaag
aaaggcgctctgtcatcgtcttctgatgcacaagattcgtcgtttatcattccaccaatc
agcaaagtgatgagtgatctttctccagcagttaccaggtcagccgatgtcaccaaagat
ttgaactacacttccaaagaagcgccaccatcacttgctcgcggacttcgaaacagcaca
ttcaatccgaatatgtcgctgacaaatcgaagtgttcacgaatcaagtgccctcgacaaa
actatcgactcagctctggatgcttccatgaatggaacttcaaatcgtcttggagttcgt
ggatccgtgagaagatcgaatttgaagcagttggacatgtctctgctcgcagattcttcg
agagttggaagagaatcccgtgtagctgatccagatgctcttcctcgaatctctgaatcc
gaaagacgtcaagacgttgtcacttccactccagcagttgaccccgttcaggctgtaatc
cagagacataatgacagaaatagagatccaccatcgttgaacttggatacgacatgcgat
gagcacactggcttggagccggtgtctgctgcaactagttcagcagcatctgttgtgtcg
acgccttctgaagaaactgttaatgtcaattcggcagcaggagtgaagcttacaaagccc
gactacttttctcttccgacaatcaatgagatgaagaacatgatcaagaacggacgtgtt
gtgttggaggatggattgacagttggaagatcgtcgtacggaagtgtctactggccagga
cgagtcgagctgaaagatgttgctctcgacgagattgttgtatttcgtcatcgcgaggtg
acggtttatccgaatgaagaagagaaagctccagaaggtcaagaactgaataggccagca
gaagtgacactcgaaagagtatggtacactgataagaagaccaagaaagaagtgcgagat
gtcgtgaaactctccgagattggttggcgcgagcatctcgagagacaaacgattcggatg
ggagccgcattcaaagattttcgtgcagaaactggaagctgggtcttccgtgtggaccat
ttcagcaagtatggattggccgacgatgatgagccaatggatgggtcccctccacagcaa
gcactacaggcatcttctccattacaagtgatcgacatgaatacatctgctcgagacgtg
aacaatcaagtgcaaagaaagaaggtgcacaaggcaacggatgctcaccatcaagaggtc
cgttttgaatga
DBGET
integrated database retrieval system
