Caenorhabditis elegans (nematode): CELE_ZK632.7
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Entry
CELE_ZK632.7 CDS
T00019
Symbol
panl-3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CELE_ZK632.7 (panl-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_ZK632.7 (panl-3)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CELE_ZK632.7 (panl-3)
mRNA degradation factors
3'-5' decay
Pan complex
CELE_ZK632.7 (panl-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
PAM2
Motif
Other DBs
NCBI-GeneID:
176391
NCBI-ProteinID:
NP_499177
WormBase:
WBGene00014015
Ensembl:
WBGene00014015
UniProt:
P34653
LinkDB
All DBs
Position
III:9819294..9823126
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AA seq
632 aa
AA seq
DB search
MQPGEGYHYDSGPNNAVHPHQLPAGSRLNQYLANNNRQGPSFGPGTPINVNAPVFVPKHQ
QPQPAQVAAPPPMVNQFAQLSIHDVPHQMIPFGQINGPPTFGPGQHMNHRASHHHQSPQM
AQQPPTLQQSAYDRYQLENRGGTTYFYTEPTEAGPDDEQYTEAEAPDGSILVNTPGAFGY
NAPLPISHMARFRGKANANLQTQFISPEIRMELINRQLAYDTKADSAIIGDIPHSVEHFS
NLVPLEIAGIQSQTTYKAFSCRDGNYYCLRRIHGNRIQHPGKQTHLVEQWKKLVHGNVVP
LREVLINCRAFDDSSLIFAYDYYPLAGTLMEKHFDTKSGTFFDPNNGFRISSPMNVSMPI
SGTGAHETLIWSYIIQIAAALRAIHSSGLACRTLDLNKIITYGNKIMISFCGIQDVLDPD
PTTIQQQQNEDLNMFGNLIVALATGRANGWRKDLYQQLKKFIEDTYSMDLRNVIGFLHNN
STRKTINEIMPMIGGRFFTVMENMQAKTDVLEAELSREMENGRLFRLVAKMNTVLERVEH
GTDDAWSETGDRFMLKLFRDYVFHQVTDQGKAWLDMAHIVQCLNKLDCGSQEKIEMVSRS
GDTQIIIDYATLKRCLDKSFRDLLGTNMMLHR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgggtgaagggtaccattatgatagtggtcctaacaacgcggtgcatccacat
cagttgcctgcaggctcgcggctcaatcagtacctcgccaataataaccgacaaggacca
tcattcggaccaggtactcccataaacgtaaatgcgcccgtattcgttccaaagcatcag
cagccacaacctgctcaggtagcagctccacctccaatggtgaatcagtttgctcagcta
tcaattcacgacgtacctcatcaaatgatacctttcggacaaattaacgggccaccgacg
ttcggtccaggccaacatatgaatcatcgtgcatctcatcaccatcaatcaccacagatg
gcacaacagccacctactctgcagcaatcagcttacgatcgatatcaactagagaatcgt
ggaggaacgacgtatttttatacagagccaacggaagctgggccagatgatgagcagtat
actgaagcagaggcacctgatggaagcattcttgtgaatactcccggagcatttggatat
aatgcaccccttccaatttctcatatggcacgatttcgagggaaagcaaacgcaaacctg
cagacacaatttatatctccagaaattcgaatggagctgatcaatcgacaattagcatac
gatacaaaagcagattccgctattataggagatattccacattccgtcgaacatttttcc
aatttggttcctttggaaattgcaggaatacaatctcaaacgacgtataaagcattctcg
tgtcgcgatggaaattattattgtctgagaagaatacatggaaatcgaattcaacatcct
ggaaaacaaactcatctcgtagaacagtggaagaaattagtacatggaaatgtggttcct
cttcgtgaagttcttattaattgtcgggcatttgatgattcttctctaatattcgcttac
gactattatccactcgctggaaccctcatggagaaacattttgataccaagagcggcaca
ttcttcgatcctaacaatggtttccgtatatcatcaccaatgaatgtttccatgccaatt
tctggaactggcgctcacgaaacactaatttggagttatataattcaaatcgctgccgca
ttgcgcgcaattcactcgagtggactcgcgtgtcgaacacttgatttgaataaaatcata
acttacggaaataagataatgatctcattttgtggtattcaagatgtactggatcccgat
ccaacaaccatccaacagcaacaaaatgaggatcttaatatgtttggaaatttaattgtg
gcattggcaactgggcgcgcaaatggatggaggaaggatctttatcaacaattgaaaaag
tttattgaggatacttattcaatggatttgcgaaacgttattggttttctacacaacaat
agtactcgaaagacaataaatgaaataatgccaatgattggaggccgttttttcactgtt
atggaaaatatgcaggcaaaaacggatgttctggaagcagaattgagcagagaaatggaa
aatggacggctcttccggcttgttgcaaaaatgaatactgttcttgaaagagtagaacac
ggaacagatgatgcatggtcagagactggagatcgctttatgctgaaattgttcagagat
tacgtattccatcaagttacggaccaaggaaaagcttggttagatatggcacatattgta
cagtgcctcaataaattggattgtggatcgcaggaaaaaatcgaaatggtttcacgaagc
ggggatacgcagattattattgattatgctacactgaaaagatgtctggacaagtcattc
cgcgatttgctgggcacgaatatgatgttgcaccgctaa
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