Cellulomonas sp. ATA003: REH70_01435
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Entry
REH70_01435 CDS
T10451
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cela Cellulomonas sp. ATA003
Pathway
cela03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cela00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
REH70_01435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cela03021
]
REH70_01435
03400 DNA repair and recombination proteins [BR:
cela03400
]
REH70_01435
Enzymes [BR:
cela01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
REH70_01435
Transcription machinery [BR:
cela03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
REH70_01435
DNA repair and recombination proteins [BR:
cela03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
REH70_01435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
Motif
Other DBs
NCBI-ProteinID:
WNB85990
LinkDB
All DBs
Position
283544..287422
Genome browser
AA seq
1292 aa
AA seq
DB search
MLDVNVFDELRIGLATAEDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEAGRAEDLPNLQNEIDLEKKEISDRRDNEINTRAQKLEAD
IAELEAEGAKSDARRKVRDSAEREMAQIRKRADAELERLDTVWDRFKNLKVADLEGDEML
YRQLTDRYGNYFEGSMGAAAIQKRLQAFDLEAESDSLRDTIKNGKGQRKTRALKRLKVVN
AFLTTSNSPEGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLYHLTSDRPDDEAKGS
GRHFSSVAEAIMAFDAGDLDLNAVVQIRMEDLVAPVGETLPEGWSEGDPIVFTTTLGRAL
FNELLPVDYPYENGVVDKKRLSVIVNDLAERYPKVEVAASLDALKEAGFRWATRSGVTIA
ISDVATPTAKAGILEEHEARAAKIQGQYEKGLITDDERRQELIEIWTQATDKVAEAMREN
FPARNTVYRMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFIA
SHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLVMPVGVAGPDGTLRR
HDKVETSVYSRTLATGVEVDGRTMGTSGEDVGDVLIDALLEAGVTELKIRSVLTCESRVG
TCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRI
QELFEARTPKGEGPIAEFTGRVTIDESERTRRIVLTPDDGSEEIAYPITKRSRLLVTDGQ
HVEVGTQLVQGAVDPKKVLRILGPRATQKHLVDEVHQVYRSQGVDIHDKHIEVIVRQMLR
RVTVLDSGDTDLLPGELAERGRFEDANRRAVAEGGQPASGRPELMGITKASLATDSWLSA
ASFQETTRVLTEAAMSGRSDPLLGLKENVILGKLIPAGTGLARYRNVTVEPTEAAKAELY
PSFGYDEIDFPALGLGSGEAIPLEDLDFGDFR
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgatgagctgcgtatcggactcgccacggctgaggacatc
cgcgcctggtcgcacggcgaggtcaagaagcccgagaccatcaactaccgcaccctgaag
ccggagaaggacggactcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacgcgctccaaggtgcgccgtgagcggatgggccacatcgagctcgccgcgccc
gtcacccacatctggttcttcaagggcgtgccctcgcgcctgggctacctgctggacctc
gcgccgaaggacctcgagaaggtcatctacttcgccgcttacatgatcacgtcggtcgac
gaggccggccgcgccgaggacctgccgaacctccagaacgagatcgacctggagaagaag
gagatctcggaccgtcgcgacaacgagatcaacacccgcgcccagaagctcgaggccgac
atcgccgagctcgaggccgagggggcgaagtcggacgcccgccgcaaggtgcgcgactcc
gccgagcgcgagatggcgcagatccgcaagcgtgcggacgccgagctcgagcgcctggac
acggtctgggaccggttcaagaacctcaaggtcgccgacctcgagggcgacgagatgctc
taccgccagctcaccgaccggtacggcaactacttcgagggctcgatgggcgccgcggcg
atccagaagcgcctgcaggcgttcgacctcgaggcggagtccgactcgctgcgcgacacc
atcaagaacggcaagggccagcgcaagacccgtgccctcaagcgcctcaaggtcgtcaac
gcgttcctcaccacgagcaactcgcccgagggcatggtcctcgacgccgtcccggtgatc
ccgccggacctgcgtccgatggtccagctcgacggtggccgtttcgccacctcggacctc
aacgatctgtaccgccgcgtcatcaaccgcaacaaccggctcaagcgcctgctcgacctc
ggtgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctgttcgacaacggtcgccgcgggcgtccggtcaccggtccgggcaaccggccgctgaag
tcgatctccgacatgctcaagggcaagcaggggcggttccgccagaacctcctcggcaag
cgcgtggactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcgggctgccgaagcagatggcgctcgagctcttcaagccgttcgtcatgaagcggctc
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcgcatggtcgagcgcgcgcgt
ccggtggtctgggacgtcctcgaagaggtcatcaccgagcaccccgtgctgctcaaccgc
gcgcccacgctgcaccgcctgggcatccaggccttcgagccgcagctcgtcgagggcaag
gcgatccacctgcacccgctcgtgtgcgccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgcccctgagcgcggaggcgcaggccgaggcccgcatcctcatgctc
tcgagcaacaacatcctcaagccgtcggacggtcgtccggtgaccatgccctcgcaggac
atgatcatcggcctgtaccacctgacgtcggaccgcccggacgacgaggccaagggctcc
gggcgccacttcagctcggtcgccgaggcgatcatggcgttcgacgcgggtgacctcgac
ctcaacgcggtcgtgcagatccgcatggaggacctcgtcgcgccggtcggcgagacgctc
ccggagggctggagcgagggcgacccgatcgtcttcacgacgaccctgggccgggccctg
ttcaacgagctgctgccggtcgactacccgtacgagaacggcgtcgtcgacaagaagcgg
ctgtcggtcatcgtcaacgacctcgccgagcggtacccgaaggtggaggtcgcggcgagc
ctcgacgcgctgaaggaggccggcttccgctgggccacccgctcgggcgtcacgatcgcc
atctcggacgtcgccacgccgacggccaaggcgggcatcctcgaggagcacgaggcccgg
gcggcgaagatccagggccagtacgagaagggtctgatcaccgacgacgagcgccgtcag
gagctcatcgagatctggacccaggccaccgacaaggtcgccgaggccatgcgggagaac
ttcccggcccgcaacaccgtgtaccggatggtcggctcgggtgcgcgtggtaactggatg
caggtccgtcagatcgccggtatgcgcggcctcgtggcgaacccgaagggcgagatcatc
ccgcgccccatcaagtccaactaccgcgagggcctgtcggtcctggagtacttcatcgcc
tcgcacggtgcccgcaaggggctggcggacaccgctctgcggaccgccgactccgggtac
ctcacgcggcgcctggtggacgtctcccaggacgtcatcatccgcgaggaggactgcggc
accgagcgcggcctggtcatgccggtcggcgtggcgggccccgacgggacgctgcgtcgt
cacgacaaggtcgagacgagcgtctactcgcgcaccctggccacgggggtcgaggtcgac
ggccgcacgatgggcacgtcgggggaggacgtcggcgacgtgctcatcgacgccctgctc
gaggccggcgtcaccgagctcaagatccgctccgtgctcacctgcgagtcccgggtcggc
acgtgcgcgaagtgctacggccgctcgctggccaccggcaagctcgtggacatcggcgag
gccgtcggcatcatcgcggcccagtcgatcggtgagcccggcacccagctgacgatgcgg
acgttccacaccggtggtgtggcctcggccgacgacatcacccagggtctgccccgtatc
caggagctgttcgaggcccgtacccccaagggtgagggcccgatcgccgagttcaccggc
cgggtcacgatcgacgagtccgagcggacccgccgcatcgtgctcaccccggacgacggc
tcggaggagatcgcctacccgatcaccaagcggtcgcgcctgctcgtcaccgacgggcag
cacgtcgaggtcggcacccagctcgtccagggcgccgtcgaccccaagaaggtgctgcgc
atcctcggcccgcgggcgacgcagaagcacctcgtggacgaggtccaccaggtgtaccgc
tcgcagggtgtggacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcgg
cgcgtgaccgtgctcgactcgggtgacacggacctgctgccgggcgagctggccgagcgc
ggccggttcgaggacgccaaccgtcgggcggtcgccgagggcggccagccggcgtccggg
cgtccggagctcatggggatcacgaaggcctcgctcgccaccgactcgtggctctcggcc
gcctccttccaggagacgacccgggtgctcaccgaggcggccatgagcgggcgcagcgac
ccgctgctcgggctcaaggagaacgtcatcctcggaaagctcatccccgcggggacgggc
ctggcccggtaccggaacgtcacggtcgagccgaccgaggcggccaaggccgagctgtac
ccgagcttcggctacgacgagatcgacttccccgccctgggcctcggctcgggcgaggcg
atcccgctcgaggacctggacttcggcgacttccgctga
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integrated database retrieval system
