Cellulomonas sp. C5510: K5O09_00475 Help Entry K5O09_00475       CDS       T08459                                  Symbol hrpA Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism celc  Cellulomonas sp. C5510 Brite KEGG Orthology (KO) [BR:celc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:celc03019]     K5O09_00475 (hrpA) Enzymes [BR:celc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      K5O09_00475 (hrpA) Messenger RNA biogenesis [BR:celc03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      K5O09_00475 (hrpA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind Helicase_C HA2_C DEAD AAA_19 AAA_22 HA2_N AAA_30 NACHT T2SSE SLFN-g3_helicase nSTAND3 Zeta_toxin ResIII PhoH SRP54 Motif Other DBs NCBI-ProteinID:  QZN85753 LinkDB All DBs Position complement(104626..109074) Genome browser AA seq 1482 aa AA seqDB search MTDADPASPAPAPRRRGRRPGRGRGGSRPAAGAPAAAGAPGGPDQGQPTGGPRGAGAHGR RGGAGRGRRLAALADARRAAVLPPVTYPEQLPVSARRAEIAAAIRDHQVVIVAGETGSGK TTQLPKIALELGRGRDGQIGHTQPRRIAARTVAERIADELGTTIGELVGYQVRFTDESSD RTLVKVMTDGILLAQIQRDPELRQYDTLIIDEAHERSLNIDFVLGYLAQLLPRRPDLKVV ITSATIDSARFAAHFAGPATPEHPEGAPAPVVEVTGRTYPVEVRYRPLSPDRPTDDPDDA PARRTAPAAKDAARDEDRDLMTAICEAVDELAAEGPGDVLVFLSGEREIRDAEEALRGHL GPRVQDARRPDAVELLPLYGRLSAAEQHRVFQAHGTRRVVLATNVAETSLTVPGIRYVVD PGTARISRYSKATKVQRLPIEPISQASANQRSGRCGRVADGIAIRLYSEEDYASRPRFTE PEILRTSLASVILQMIAVGVAAGPDDVASFPFVDPPDVRAVRDGVQLLTELGALEAGPSG TRLTDTGRALAQLPMDPRLARMIVEGGRRGVAREVMVVAAALSIQDPRERPVEQRAQADQ AHARFADPTSDFLTYLNLWQYVRDAQRDLSGSAFRRLCRSEYLNWLRLREWQDVVTQLKE LAKPLGITVNPPRRTDRDLSAGSADHEDPATAARGSLRLEWDADRIHVALLSGLLSQIGM QEASDLSGGAPQRGRGRDGGRAPDRRGRNEYLGARGARFAIFPGSALAKKPPAWVMAGEL VETSRLWGRDAARIQPEWAEELAGHLVKRSYSEPSWSSKQGAAMALERVMLYGVPIVTGR RVLFGKVDAEHARELFIRHALVEGDWTTHHAFFAENRRLLDEAEDLEARSRRRGLVVDDD ALFDFYDERIPDDVVSARHFDQWWKGARRQDPDLLTFTRELLVTEDAADAGIEGAFPSTW PQGDLELPLTYQFQPGTDADGVTVHVPLVALARVQPDGFDWMVPGLREELVTATIRALPK PVRVQLVPAPDVARDVVAWFDAHTASWADTVRAGDAAPSFRATFRQAVRALRDVEVPEDA VDEDRLPPHLRMTFRVVDDRGRVVDEGKDLAVLQRRLAARTQDAVSTAVRSAVRDAMADA ARGDGDRGRGERTAPRPAAPVPGAAPAGRPAPAALPGFDAGDLSTWPDGLPGGELPERVE TTDPSGLTVRGYPALVEHGRGPAATVRVEVLADAGEQALRHRAGLRRLLLRDVGLATARI TSRWTGAQALALAASPYPSTEALVSDVQLAAVDRLLTEHLAGRPATSVRTAAAYAEARAV VRDRLEDATHRVVGDVVAVLGAARDLDAAVRGTRSLALLGTVRDVQAQAEALVHDGFVAE TGADRLPHLTRYLRAAAHRLDKAGANPARDEQLAWQVRDLEQLLGQTRARVTSRTPVPAA LAALDDARWLVEELRVSLFAQQLGTPVPVSEKRIRKALAALG NT seq 4449 nt NT seq  +upstreamnt  +downstreamnt gtgactgacgccgaccccgcctcccccgcacccgccccccggcggcgcggtcggcgaccc gggcggggacgcggcgggagccgcccggcagccggggcacccgcagcggccggcgcgccc gggggccccgaccaggggcagccgacgggcgggccccgcggcgccggcgcgcacgggcgc cggggcggtgcgggccgcggacgccgcctcgccgccctggccgacgcccgccgcgcggcc gtcctgccgccggtcacctacccggagcagctccccgtctcggcccgccgcgcggagatc gccgccgcgatccgggaccaccaggtcgtcatcgtcgcgggcgagaccggatccgggaag accacgcagctcccgaagatcgcgctggagctcgggcgcggccgggacgggcagatcggg cacacgcagccccggcggatcgccgcccgcacggtcgcggagcgcatcgccgacgagctg gggacgaccatcggcgagctggtcggctaccaggtgcggttcaccgacgagtcgtcggac cggacgctcgtcaaggtgatgacggacggcatcctgctcgcgcagatccagcgggacccg gagctgcgccagtacgacacgctcatcatcgacgaggcgcacgagcgctcgttgaacatc gacttcgtcctcgggtacctcgcgcagctgctgccgcgacgcccggacctcaaggtggtc atcacctccgcgaccatcgactcggcgcggttcgcggcccacttcgccggaccggcgacg ccggagcaccccgagggcgcacccgctccggtcgtcgaggtcaccgggcgcacctacccc gtggaggtccggtaccggccgctgtcccccgaccggcccaccgacgacccggacgacgcc ccggcccggcgtaccgcgccggcggcgaaggacgccgccagggacgaggaccgcgacctc atgacggcgatctgcgaggccgtcgacgagctcgccgccgaggggcccggcgacgtgctg gtgttcctgtccggcgagcgggagatccgcgacgccgaggaggcgctgcgggggcacctg ggcccacgggtgcaggacgcgcggcgccccgacgcggtcgagctgctgccgctgtacggc cggctgtccgccgccgagcagcaccgcgtgttccaggcgcacggcacccgccgcgtcgtg ctcgccaccaacgtcgccgagacgtcgttgacggtgcccggcatccgctacgtcgtcgac ccggggaccgcccgcatctcgcggtactccaaggccacgaaggtgcagcggctgccgatc gagccgatctcgcaggcgtccgcgaaccagcggtccgggcgctgcgggcgcgtcgccgac ggcatcgcgatccggctgtactccgaggaggactacgcctcccgcccgcggttcaccgag ccggagatcctgcggacgtccctggcgtccgtgatcctccagatgatcgcggtcggcgtc gccgcggggccggacgacgtggcgtcgttcccgttcgtcgacccgccggacgtgcgggcc gtccgcgacggcgtgcagctgctcaccgagctcggcgcgctcgaggccgggccgtcgggc acccgcctcacggacaccgggcgggcgctcgcccagctcccgatggacccgcggctggcg cggatgatcgtcgagggcggccgccggggtgtcgcgcgcgaggtgatggtcgtggccgcc gcgctgtcgatccaggacccgcgcgagcgccccgtcgagcagcgcgcccaggccgaccag gcgcacgcccgcttcgccgacccgacctcggacttcctcacctacctcaatctgtggcag tacgtccgcgacgcgcagcgcgacctgtcgggctcggcgttccggcggctgtgccggtcg gagtacctcaactggctgcggctgcgcgagtggcaggacgtggtgacgcagctcaaggag ctcgcgaagccgctcggcatcaccgtgaaccccccgcgccgcaccgaccgcgacctgtcc gccggctcggccgaccacgaggacccggcgacggccgcgcgcggctcgctgcggctcgag tgggacgcggaccgcatccacgtggcgctgctgtcgggcctgctgtcgcagatcgggatg caggaggcgtccgacctgtcgggcggcgccccgcagcgcggccggggccgggacggcggg cgcgcacccgaccggcgcgggcgcaacgagtacctcggcgcgcggggtgcgcggttcgcg atcttcccgggctcggcgctcgccaagaagccgccggcgtgggtgatggccggcgagctc gtcgagacctcccggctgtgggggcgggacgccgcgcggatccagcccgagtgggccgag gagctcgccgggcacctggtgaagcggtcgtactcggagccgtcgtggtcctccaagcag ggcgccgccatggccctggagcgcgtcatgctctacggcgtcccgatcgtcacgggtcgg cgggtgctgttcgggaaggtggacgccgagcacgcgcgcgagctgttcatccggcacgcc ctcgtcgagggcgactggacgacgcaccacgcgttcttcgcggagaaccgccgcctgctc gacgaggcggaggacctggaggcgcggtcccggcggcgcgggctcgtggtggacgacgac gcgctgttcgacttctacgacgagcggatccccgacgacgtggtgtccgcgcgccacttc gaccagtggtggaagggcgcccgccggcaggaccccgacctgctgacgttcacgcgcgag ctgctggtcaccgaggacgccgccgacgccggcatcgagggggcgttcccgtcgacgtgg ccgcagggcgacctggagctgccgctgacctaccagttccagccgggcaccgacgcggac ggcgtgaccgtccacgtgccgctcgtggccctcgcgcgcgtgcagcccgacgggttcgac tggatggtgcccggcctgcgcgaggagctcgtgaccgccacgatccgcgcgctgcccaag ccggtgcgcgtccagctggtccccgcaccggacgtggcgcgggacgtcgtcgcgtggttc gacgcgcacaccgcgtcctgggcggacacggtccgcgccggggacgccgcgccgtcgttc cgcgcgacgttccggcaggccgtccgggcgctgcgggacgtcgaggtgcccgaggacgcc gtcgacgaggaccggctgccgccgcacctgcgcatgacgttccgcgtggtcgacgaccgg gggcgggtcgtcgacgagggcaaggacctcgcggtgctgcagcgccggctcgcggcccgg acgcaggacgccgtcagcacggcggtgcggtcggcggtgcgcgacgcgatggccgacgcg gcacgcggcgacggcgaccggggccgtggggagcggacggcgccccggccggccgcaccc gtacccggcgccgcccccgccggacgccccgcccccgccgcgctgcccgggttcgacgcc ggggacctgtccacctggcccgacggcctgcccggcggcgagctgcccgagcgcgtcgag accaccgaccccagcggcctcaccgtccgcggctacccggcgctcgtcgagcacggccgc ggcccggcggccaccgtccgcgtcgaggtgctcgccgacgccggcgagcaggcgctgcgg caccgcgccgggctgcgccgcctgctgctgcgcgacgtcggcctcgcgaccgcccggatc accagccggtggaccggcgcgcaggcgctcgcgctcgccgccagcccgtacccgagcacc gaggccctcgtctccgacgtgcagctcgcggcggtcgaccgcctgctcaccgagcacctc gccggccggcccgcgacgtccgtccgcaccgcggcggcgtacgccgaggcccgcgcggtc gtccgggaccgtctggaggacgccacccaccgcgtcgtcggggacgtcgtcgccgtgctc ggcgcggcacgggacctcgacgcggcggtccggggcacccggtcgctcgccctgctcggc acggtccgggacgtgcaggcccaggccgaggcgctcgtgcacgacgggttcgtcgccgag accggcgccgaccggctgccgcacctcacccgctacctgcgcgccgccgcccaccggctc gacaaggcgggcgccaaccccgcgcgcgacgagcagctcgcctggcaggtgcgcgacctc gagcagctgctcggccagacccgcgcccgcgtgacctcccggaccccggtgcccgcagcc ctcgcggcgctggacgacgcccggtggctggtcgaggagctgcgggtcagcctgttcgcg cagcagctcggcacgccggtgccggtgagcgagaagcggatccggaaggccctcgcggcg ctgggctga

DBGET integrated database retrieval system