Cellulomonas sp. C5510: K5O09_04865
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Entry
K5O09_04865 CDS
T08459
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
celc
Cellulomonas sp. C5510
Pathway
celc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
celc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5O09_04865 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
celc03021
]
K5O09_04865 (rho)
03019 Messenger RNA biogenesis [BR:
celc03019
]
K5O09_04865 (rho)
Transcription machinery [BR:
celc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K5O09_04865 (rho)
Messenger RNA biogenesis [BR:
celc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K5O09_04865 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
FANC_SAP
PIP5K
ResIII
Motif
Other DBs
NCBI-ProteinID:
QZN86489
LinkDB
All DBs
Position
1073328..1075577
Genome browser
AA seq
749 aa
AA seq
DB search
MRSETGNAPAHRRRRFRATGEAPPTRRPRPEGRTQTAPRRRVAVPDEGEGSFVTDTIEPA
VSSSSGGSARGGAISAMRMPELQALAAQLGVTGTSRMRKTDLVDAIRAKRSGAGTGTRAE
DGAAAEPRARRAASRAAGRPAAAADAPVAPAAADAPAARTAPAETPAVDDEARRGSSRRR
PVRAQAEAQGEQRADGEDGPSGQRPGRTVDVLAGLEAVERSLDSRQGGQQPEVRDDRAAR
AADAVGSVTGERRSRRSGRGAGAPTVDVTLPEGPTGGDGQRQRPQQEQPGEQQDRARQDR
QQDQGGEDRDDERGGRRRRSRDRYRDRDRTKRGRGQRGPGDAAYEEIELSEDDVLVPVAG
ILDVLESYAFVRTSGYLPGPNDVYLPLGQVRKAGLRRGDAITGAVRAPREGEAPGQQQAG
RPNKANALVRLDTVNGMAPEQARQRPEFSKLTPLYPQDRLRLENESNHLTPRVIDIVAPI
GKGQRGLIVAPPKAGKTIIMQQIANSITANNPEVHLMVVLVDERPEEVTDMERTVKGEVI
ASTFDRPASDHTMVAELAIERAKRLVELGQDVVVLLDSLTRLSRAYNLAAPASGRILSGG
VDASALYPPKRFFGAARNIEHGGSLTILASALVETGSKMDEVIFEEFKGTGNMELRLSRS
LADKRIFPAVDVNASGTRREEILIAPDELKIIWKLRRVMGALDQQQAIELLLGKLRETRS
NVEFLLQVQKTTPGTGAHGHDETQTRSIV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgagatccgagaccgggaacgcaccagcccaccgacgtcgacgcttccgcgcgaccggt
gaggccccaccgacgcgacggccccgacccgagggccggacgcagaccgcgccccgacgg
agggtggcggtccccgacgagggggaagggtccttcgtgacagacaccatcgagccggcc
gtgagcagcagctccggcggttccgcccgtggcggcgcgatctccgcgatgcgcatgccc
gagctccaggcactcgccgcgcagctcggcgtgacgggcacctcgcggatgcgcaagacc
gacctggtcgacgccatccgggccaagcgctccggcgccggcaccggcacgcgcgccgag
gacggcgccgctgccgagccgcgcgcccgccgcgccgcgtcccgtgccgcgggtcggccc
gctgcggctgccgacgcgccggtcgcgcccgccgccgcggacgccccggcggcgcgcacg
gcccccgccgagaccccggccgtcgacgacgaggcccgtcgcgggtcctcgcgccgccgc
cccgtacgggcgcaggccgaggcgcagggcgagcagcgcgccgacggtgaggacggtccc
tccgggcagcgacccggccgcaccgtggacgtgctggcgggcctcgaggctgtcgagcgc
tccctcgacagccgccagggcgggcagcagcccgaggtgcgcgacgaccgcgctgcgcgt
gccgccgacgccgtcggctccgtgacgggcgagcgccgctcgcgccgctcggggcgggga
gccggcgccccgacggtcgacgtgacgctgcccgaggggccgacgggcggcgacggccag
cggcagcgcccgcagcaggagcagccgggcgagcagcaggaccgggctcggcaggaccgc
cagcaggaccagggcggggaggaccgcgacgacgagcgcggcggccgccgtcggcgctcg
cgcgaccggtaccgcgaccgtgaccggaccaagcgcggccgcggccagcggggcccgggc
gacgccgcctacgaggagatcgagctgagcgaggacgacgtcctcgtcccggtcgccggc
atcctcgacgtgctcgagtcctacgccttcgtgcgcaccagcgggtacctgcccggcccg
aacgacgtctacctgcccctcggtcaggtccgcaaggcgggtctgcgccgcggcgacgcc
atcaccggcgcggtccgtgcgccccgcgagggcgaggcgccgggccagcagcaggccggc
cgcccgaacaaggccaacgcgctcgtccggctcgacaccgtcaacggcatggcgcccgag
caggcacggcagcggcccgagttctccaagctgacgccgctgtacccgcaggaccggctg
cggctcgagaacgagtcgaaccacctgacgccgcgggtcatcgacatcgtcgcccccatc
ggcaagggccagcgcggcctcatcgtcgcgcccccgaaggccggcaagacgatcatcatg
cagcagatcgccaactcgatcaccgcgaacaaccccgaggtccacctcatggtcgtgctc
gtcgacgagcgccccgaggaggtcacggacatggagcggaccgtgaagggcgaggtcatc
gcctcgaccttcgaccgccccgcgtcggaccacacgatggtcgcggagctcgcgatcgag
cgcgcgaagcgcctggtcgagctcggccaggacgtcgtggtgctgctcgactcgctgacc
cgcctgtcccgtgcgtacaacctcgcggcgccggcgtccgggcgcatcctgtccggcggc
gtcgacgcctcggcgctctacccgccgaagcggttcttcggtgccgcgcgcaacatcgag
cacggcggctcgctgacgatcctcgcctcggcgctggtggagaccggctccaagatggac
gaggtcatcttcgaggagttcaagggcaccgggaacatggagctccggctgtcccggtcg
ctcgcggacaagcgcatcttcccggcggtcgacgtcaacgcgtccggcacgcgtcgcgag
gagatcctcatcgccccggacgagctcaagatcatctggaagctccgccgcgtcatgggt
gcgctggaccagcagcaggccatcgagctgctgctcggcaagctccgggagacgcgcagc
aacgtcgagttcctgctccaggtgcagaagacgacgcccggcaccggcgcgcacggccac
gacgagacccagacccgctcgatcgtctga
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