Cellulomonas sp. C5510: K5O09_09615
Help
Entry
K5O09_09615 CDS
T08459
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
celc
Cellulomonas sp. C5510
Pathway
celc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
celc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5O09_09615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
celc03019
]
K5O09_09615
03009 Ribosome biogenesis [BR:
celc03009
]
K5O09_09615
Enzymes [BR:
celc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K5O09_09615
Messenger RNA biogenesis [BR:
celc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K5O09_09615
Ribosome biogenesis [BR:
celc03009
]
Prokaryotic type
rRNA helicases
K5O09_09615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Flavi_DEAD
Helicase_RecD
Cas3-like_C_2
DUF6506
Motif
Other DBs
NCBI-ProteinID:
QZN84160
LinkDB
All DBs
Position
complement(2070080..2071930)
Genome browser
AA seq
616 aa
AA seq
DB search
MTSVLDPALPASDDATPAAVPAVTFADLDLPAALRAAVDELGFTAPTAIQAEAIPALLAG
RDITGVAQTGTGKTAAFGLPLLAAVDPDRREVQAIVLAPTRELAMQVAEALESFAAHLPG
LQVVPVYGGAPYLPQQRALRGGAQVVVGTPGRVIDHLDRGSLTLDGVRFLVLDEADEMLR
MGFAEDVDRIASATPARKQVALFSATMPQAIRRVAAQHLTDPVEVSVARQSSTVSSVQQT
YAVVPFRHKAGALARVLAVTSAEAAIVFVRTRSAAEDVAVSLVERGVAAAYISGDVAQSD
REKIVERVRSGAITVLVATDVAARGLDIDRIGLVVNFDVPGEPEAYVHRIGRTGRAGRTG
EALTFVTPNEQGRLRAIERTTRQRLAQIEIPSPADVSAHRVAALLGRVPARAEAGRLDLY
RTAVADFLAANPAVEAAELVAVLAALAVGDEGPAPRPADGDDLDDALSRARLAPERGERG
PRHDRSAGPDGEHRRNPARPTGALRYRLAVGQQHGAQPGAIVGALTNEGGLQGKDLGKID
IFSTFSLVEIPAGLTPEAFDRIGRARVAGRPLRIRVDEGPRAARPERGASRGPVHHAREP
RAGGRDARPRRSATPR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgtgctcgaccctgccctgcccgcctccgacgacgcgaccccggccgccgtc
cccgcggtgaccttcgccgacctcgacctgcccgccgccctgcgtgctgccgtcgacgag
ctcggcttcaccgccccgaccgccatccaggccgaggcgatccccgccctgctggccggg
cgggacatcaccggggtcgcccagaccggcaccggcaagaccgccgcgttcgggctgccc
ctgctcgccgcggtcgacccggaccgccgcgaggtgcaggccatcgtcctcgcgccgacg
cgcgagctcgccatgcaggtggccgaggccctggagtcgttcgccgcgcacctccccggc
ctccaggtcgtccccgtgtacggcggcgcgccctacctgccgcagcagcgcgcgctgcgt
ggcggcgcccaggtcgtcgtcgggacgcccgggcgcgtcatcgaccacctggaccgcggt
tccctgacgctcgacggggtgcggttcctcgtcctcgacgaggccgacgagatgctgcgc
atgggcttcgcggaggacgtcgaccgcatcgcctccgccacgcccgcccgcaagcaggtc
gcgctgttctcggcgacgatgccccaggcgatccggcgcgtcgcggcccagcacctcacc
gacccggtcgaggtcagcgtggcacggcagtcgtcgaccgtctcgagcgtgcagcagacg
tacgcggtggtgccgttccgccacaaggccggggcgctggcgcgcgtgctcgccgtcacg
tccgccgaggcggccatcgtcttcgtccggacgcggagcgccgcggaggacgtcgcggtc
tccctggtggagcgcggcgtcgccgcggcctacatctccggggacgtcgcgcagtccgac
cgcgagaagatcgtcgagcgggtgcgcagcggcgcgatcaccgtgctggtcgccaccgac
gtcgcggcgcgcggcctcgacatcgaccgcatcgggctggtcgtcaacttcgacgtcccc
ggggagccggaggcgtacgtccaccgcatcgggcgcacgggacgcgccgggcgcaccggc
gaggcgctgacgttcgtgaccccgaacgagcagggccgcctccgcgcgatcgagcgcacg
acgcgccagcggctcgcgcagatcgagatcccctcccccgccgacgtctccgcgcaccgc
gtcgcggctctgctcggccgcgtgccggcgcgcgccgaggccggccggctggacctgtac
cgcacggccgtcgcggacttcctcgccgcgaacccggctgtcgaggccgccgagctcgtg
gccgtgctcgcggcgctcgccgtcggcgacgagggccccgcgccccggccggcggacggc
gacgacctggacgacgcgctctcgcgggcacgcctggccccggagcgcggcgagcgcggc
ccgcgtcacgaccgcagcgcgggacccgacggcgagcaccgccgcaaccccgcgcggccg
accggcgcgctgcgctaccgcctggccgtcgggcagcagcacggcgcacagcccggcgcc
atcgtgggcgccctcaccaacgagggcggcctgcagggcaaggacctggggaagatcgac
atcttctccacgttctcgctggtcgagatcccggcaggtctgacccccgaggcgttcgac
cggatcggccgcgcccgcgtggccggccgtcccctgcgcatccgggtggacgagggcccg
cgggccgcacggccggagcgcggggcgtcccgcggtcccgtgcaccacgcccgcgagccg
cgtgccggcggccgggacgcgcgcccgcgccgcagcgccaccccgcgctga
DBGET
integrated database retrieval system
