Cellulomonas sp. C5510: K5O09_11290
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Entry
K5O09_11290 CDS
T08459
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
celc
Cellulomonas sp. C5510
Pathway
celc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
celc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5O09_11290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
celc03019
]
K5O09_11290
03400 DNA repair and recombination proteins [BR:
celc03400
]
K5O09_11290
Enzymes [BR:
celc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5O09_11290
Messenger RNA biogenesis [BR:
celc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K5O09_11290
DNA repair and recombination proteins [BR:
celc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K5O09_11290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QZN84448
LinkDB
All DBs
Position
2421772..2423985
Genome browser
AA seq
737 aa
AA seq
DB search
MTQQTPGATDPTSDEIADAGGSTTRADLREEAETVLRRLVGRDDARLRDDQWRAVDALVS
DHRRALVVQRTGWGKSAVYFVATALLRARGAGPTVLVSPLLALMRNQVASAQRAGVRAVT
LNSANVTEWDDVHAQIAAGDVDVLLVSPERLTHPQFRDEVLPRLAADAGLVVVDEAHCIS
DWGHDFRPDYRRIRTLLAELPDGIPVLATTATANARVTADVAEQLGTAVRDDVLVLRGPL
DRSSLDLSVVRLPDTAGQLAWLAQNLPAFEGSGIVYCLTIAAAQQVTEHLRSAGLDVRAY
TGQTDPAEREVAEADLLANRVKALVATSALGMGFDKPDLGFVVHVGAPSSPIAYYQQVGR
AGRAAEAVGGRATAVLLPGREDRAIWEWFASTAFPPEDDVRAALRALREGGVLSTAALET
HVSLRRSRLEQMLKVLDVDGAVRRVRGGWEATGEPWSYDAERYERVTATRRAEQQLMVDY
VTTDGCRMAHLRRALDDPELAGPGGEEWRCGRCDRCTGSTVGVAPDAEHVAGAQALLTSA
GVAVDPRRQWPTGMATLGLDLRGRIPVEENAEPGRAVARLDSVGWGGLLRDLFGGEADPE
AGLPAALRDPVLATLDAWRPEHRPEGVVVVRSSTRPALVEHLANGVARHLGVPLVGAVAP
RPDTPPSRHDVNSAHRLAAVARRLELDLGPAAAAGLPGRTVLLVDDRTDSGWTLTVAARL
LRQAGAAAVLPFVLGVG
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcagacgccgggcgcgaccgacccgacctccgacgagatcgccgacgccggc
ggcagcacgacgcgcgccgacctgcgcgaggaggcggagaccgtgctgcgccgcctcgtg
gggcgtgacgacgcgcgtctgcgcgacgaccagtggcgcgccgtcgatgcgctcgtgtcc
gaccaccgccgcgcgctcgtcgtccagcgcaccgggtggggcaagtcggccgtgtacttc
gtggcgacggccctgctgcgcgcccgcggcgcgggtccgacggtgctcgtctcgccgctg
ctcgcgctcatgcggaaccaggtcgcgtccgcgcagcgtgccggcgtgcgagcagtgacg
ctcaactccgccaacgtcaccgagtgggacgacgtgcacgcgcagatcgccgcgggcgac
gtcgacgtgctgctggtctcccccgagcgcctcacccacccccagttccgggacgaggtg
ctgccgcggctggccgcggacgccggcctggtggtcgtggacgaggcgcactgcatctcc
gactggggccacgacttccggcccgactaccgtcgcatccgcacgctgctcgcggagctg
ccggacgggatccccgtgctggcgacgacggccacggcgaacgcccgcgtcaccgcggac
gtcgcggagcagctcgggaccgcggtccgcgacgacgtcctcgtcctgcgcgggccgctc
gaccgctccagcctcgacctgtccgtcgtgcggctccccgacacggccgggcagctggcc
tggctcgcgcagaacctgcccgccttcgagggctccgggatcgtctactgcctgacgatc
gcggccgcccagcaggtcaccgagcacctgcgctccgccggcctcgacgtgcgggcgtac
accgggcagaccgatcccgccgagcgggaggtcgccgaggcggacctgctcgcgaaccgc
gtcaaggcgctggtcgccacctccgccctcggcatgggcttcgacaagccggatctcggg
ttcgtcgtgcacgtcggggccccgtcctcccccatcgcgtactaccagcaggtcggccgg
gccggacgggcggccgaggccgtcggcgggcgcgcgaccgcggtgctgctgccgggccgg
gaggaccgcgcgatctgggagtggttcgcgtcgaccgcgttccccccggaggacgacgtg
cgggccgcgctgcgagccctgcgcgagggcggcgtgctgtccaccgcggcgctcgagacg
cacgtctcgctgcgccggtcacgcctcgagcagatgctcaaggtgctcgacgtcgacggt
gcggtccggcgcgtgcggggcggctgggaggcgaccggcgagccctggtcgtacgacgcg
gagcggtacgagcgcgtcaccgccacccgtcgggccgagcagcagctcatggtcgactac
gtcaccaccgacggctgccggatggcccacctgcgacgggcgctcgacgaccccgagctc
gcaggccccggcggcgaggagtggcggtgcggacgctgcgaccgctgcacgggcagcacg
gtgggcgtggcgccggacgccgagcacgtcgccggcgcccaggcgctgctcacctcggcg
ggtgtcgccgtcgacccgcgccggcagtggcccaccgggatggcgaccctgggactcgac
ctgcgcgggcggatcccggtcgaggagaacgccgagccggggcgcgccgtcgcccggctc
gactccgtcgggtggggcgggctgctgcgcgacctgttcggcggcgaggcggacccggag
gccggcctcccggcggcgctgcgcgacccggtgctcgccaccctcgacgcgtggcggccc
gagcaccggcccgagggggtcgtggtggtgcgttcctcgacgcggcccgccctcgtcgag
cacctcgcgaacggcgtcgcccggcacctcggcgtcccgctcgtcggcgccgtcgcgccc
cggcccgacaccccgccgagccggcacgacgtcaactccgcgcaccgcctcgccgcggtc
gcccggcggctcgagctggacctcgggcccgccgcggccgccgggctccccggacggacc
gtgctgctcgtcgacgaccgcaccgactccgggtggacgctcaccgtcgccgcgcggctg
ctccggcaggcgggcgctgcggcggtgcttccgttcgtgctcggggtgggctga
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