Cellulomonas sp. C5510: K5O09_11310
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Entry
K5O09_11310 CDS
T08459
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
celc
Cellulomonas sp. C5510
Pathway
celc03030
DNA replication
celc03430
Mismatch repair
celc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
celc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5O09_11310 (dnaE)
03430 Mismatch repair
K5O09_11310 (dnaE)
03440 Homologous recombination
K5O09_11310 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
celc03032
]
K5O09_11310 (dnaE)
03400 DNA repair and recombination proteins [BR:
celc03400
]
K5O09_11310 (dnaE)
Enzymes [BR:
celc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K5O09_11310 (dnaE)
DNA replication proteins [BR:
celc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K5O09_11310 (dnaE)
DNA repair and recombination proteins [BR:
celc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K5O09_11310 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
MCM10_OB
DUF655
Motif
Other DBs
NCBI-ProteinID:
QZN84452
LinkDB
All DBs
Position
complement(2426775..2430356)
Genome browser
AA seq
1193 aa
AA seq
DB search
MASGGSNGSDFVHLHAHSEYSMLDGAARVGEMLAEAQRLGQSAMAITDHGYLFGAFDFYS
QATKLGVKPIIGVEAYVTPGTSRFDQTRVRWGEAHQAADDVSARGAYTHLTLLSQTTEGM
HNLFRMGSLASLEGQMGKWPRMDRELLQTYSTGLIATSGCPSGEIQTRLRLGHDAEALRA
AGELQDIFGKENFFVELMDHGLEIERRTIKGLLRIAETLGAPVVATNDLHYTRKEDAHAH
EVLLAVQSGSTLDEPTYDQGGSRFAFSGDGYYVKSAQEMRQTWSELPEACDNTLLIAERC
DVEFPTGANYMPRFPVPDGEDENSWFIKEVERGLHRRYPGGIPDDVRAQATYETDVIVQL
GFSGYFLVVADFIAWARAQGIRVGPGRGSAAGSMASYAMGITELDPLRHGLIFERFLNPE
RVSWPDVDVDFDERRRGEVIRYVTEKYGDDRVAQIVTYGTIKAKQALKDSSRVLGFPFAM
GEKLTKAMPPAVMGKDIPLSGMYDPEHPRYAEAEEFRQVVAADPEAQRVLETARGLENLK
RQWGVHAAGVIMSSEPLIDIIPIMKRPQDGAVITQFDYPTSEGLGLIKMDFLGLRNLTIL
DDALRNIVMNDKPAIELEEIPLDDKATYELLARGDTLGVFQLDGGPMRALLRQMRPDNFE
DISAVIALYRPGPMGMNSHTNYALRKNGLQPITPIHPELEEPLAEVLDGTYGLIVYQEQV
QKAAQVLAGYSLGQADLLRRAMGKKKKEILDKEFVPFEAGMKERGYSKPAIQAVWDTLVP
FAGYAFNKAHSAGYGVVSYWTAYLKANYPTEYMAGLLTSVGDDKDKSALYLGECRRMGIT
VLPPDVNSSSALFTAVGADIRFGLTAVRNVGANVVDAIVRTREEKGEFTSFTDFLDKVPA
VVCNKRTIESLIKAGAFDSLGHARRALLLVHEQAVESVIGVKRREAEGQFDLFADLGAGD
DPGFSVQVPDVPDWDKKQRLQFEREMLGLYVSDHPLSGLEHVLSAAADVSIATLNADEAR
PDGSTVVVAGLVTSLQRKMSKQGNPWAAVTLEDMEGSVEIMFFGETYLAYSTVLAEDAVI
VVRGRVRRRDDAMQLQAMEVSLPDLSAVADAPVVVRMSEARCTPPVLERLLEVLRTHPGM
SEIHFRVAQVRGGTALVMPNGGWRVERSPALYGDLKALLGPGCLESATTPVGV
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggtggcagcaacggttccgacttcgtccacctgcacgcgcactccgagtac
tcgatgctcgacggtgcggcccgggtcggtgagatgctcgcggaggcccagcgcctcggt
cagtcggcgatggcgatcaccgaccacggctacctgttcggcgcgttcgacttctactcc
caggccacgaagctcggcgtcaagccgatcatcggcgtcgaggcgtacgtcacgcccggc
accagccggttcgaccagacgcgcgtccgctggggcgaggcccaccaggcggccgacgac
gtctccgcccgcggcgcctacacgcacctcacgctgctgtcccagaccaccgagggcatg
cacaacctgttccggatgggctcgctggcctcgctcgaggggcagatgggcaagtggccg
cgcatggaccgcgagctgctgcagacgtacagcacggggctgatcgcgacgtcggggtgc
ccgtccggggagatccagacgcggctgcggctggggcacgacgcagaggcgctgcgggcg
gccggggagctgcaggacatcttcggcaaggagaacttcttcgtcgagctgatggaccac
ggtctcgagatcgagcgccggaccatcaagggcctgctgcggatcgcggagacgctcggc
gcgccggtcgtcgcgacgaacgacctgcactacacccgcaaggaggacgcgcacgcgcac
gaggtgctgctggccgtccagtccgggtccacgctcgacgagccgacgtacgaccagggc
gggtcccgcttcgccttcagcggcgacggctactacgtgaagtcggcgcaggagatgcgc
cagacctggtcggagctgccggaggcctgcgacaacaccctgctcatcgcggagcggtgc
gacgtcgagttcccgacgggcgcgaactacatgccccggttccccgtgccggacggcgag
gacgagaactcctggttcatcaaggaggtcgagcgcggcctgcaccggcgctacccgggt
ggcatcccggacgacgtccgcgcccaggcgacgtacgagaccgacgtcatcgtccagctc
ggcttctccgggtacttcctcgtcgtcgccgacttcatcgcgtgggcgcgcgcgcagggc
atccgcgtcgggccggggcgtggctccgcggcggggtcgatggcctcgtacgcgatgggc
atcaccgagctcgacccgttgcggcacgggctgatcttcgagcggttcctcaaccccgag
cgcgtgtcctggccggacgtcgacgtcgacttcgacgagcgccggcgcggcgaggtcatc
cggtacgtcaccgagaagtacggcgacgaccgggtcgcgcagatcgtcacctacggcacc
atcaaggcgaagcaggccctcaaggactcctcgcgcgtgctgggcttcccgttcgcgatg
ggggagaagctcaccaaggcgatgccgcccgccgtcatgggcaaggacatcccgctgtcc
ggcatgtacgaccccgagcacccgcgctatgccgaggccgaggagttccgccaggtcgtc
gccgccgaccccgaggcgcagcgcgtcctggagaccgcgcgcggcctggagaacctcaag
cgccagtggggcgtgcacgccgccggcgtcatcatgtccagcgagccgctgatcgacatc
atcccgatcatgaagcgcccgcaggacggcgccgtcatcacgcagttcgactacccgacg
tccgagggcctcggcctcatcaagatggacttcctcgggctgcggaacctcaccatcctc
gacgacgcgctgcgcaacatcgtcatgaacgacaagccggccatcgagctcgaggagatc
cccctcgacgacaaggcgacgtacgagctgctggcgcgcggcgacaccctgggtgtgttc
cagctcgacggcggcccgatgcgggcgctgctgcggcagatgcgccccgacaacttcgag
gacatctccgccgtcatcgccctgtaccgtcccgggccgatgggcatgaactcgcacacg
aactacgcgctgcgcaagaacggcctccagccgatcacgcccatccacccggagctcgag
gagcccctcgcggaggtcctcgacggcacgtacggcctcatcgtgtaccaggagcaggtg
cagaaggccgcgcaggtgctcgcgggctactcgctcggccaggcggacctgctgcgccgc
gcgatgggcaagaagaagaaggagatcctcgacaaggagttcgtgcccttcgaggcgggc
atgaaggagcgcggctactcgaagcccgcgatccaggcggtctgggacacgctcgtgccg
ttcgcgggctacgcgttcaacaaggcgcactccgcgggctacggcgtggtgtcgtactgg
acggcgtacctcaaggcgaactacccgaccgagtacatggcgggcctgctcacctcggtg
ggcgacgacaaggacaagtccgcgctgtacctcggcgagtgccggcgcatgggcatcacc
gtcctgccgccggacgtcaactcgtcgtccgcgctcttcacagccgtcggggcggacatc
cggttcggcctcaccgccgtccgcaacgtcggcgccaacgtggtcgacgcgatcgtgcgg
acgcgggaggagaagggcgagttcacctcgttcaccgacttcctcgacaaggtcccggcg
gtcgtctgcaacaagcggaccatcgagtccctcatcaaggccggggcgttcgactcgctc
ggccacgcgcgccgggcgctgctgctcgtgcacgagcaggccgtggagtccgtgatcggc
gtcaagcgccgcgaggccgaggggcagttcgacctgttcgcggacctcggcgcgggcgac
gaccccgggttctccgtccaggtcccggacgtgcccgactgggacaagaagcagcggctg
cagttcgagcgggagatgctgggtctgtacgtgtccgaccacccgctgtccgggctcgag
cacgtgctgtccgccgccgccgacgtctcgatcgcgaccctcaacgccgacgaggcgcgc
cccgacgggtccaccgtcgtcgtcgccggcctcgtgacgtccctgcagcgcaagatgtcc
aagcagggcaacccgtgggccgccgtgacgctggaggacatggaggggtcggtcgagatc
atgttcttcggcgagacctacctcgcctactcgaccgtgctcgccgaggacgccgtcatc
gtcgtgcgggggcgcgtccgccgccgggacgacgccatgcagctgcaggcgatggaggtg
tcgctgcccgacctgtcggctgtcgcggacgcgcccgtcgtggtgcggatgtcggaggcg
cgctgcacgccgccggtcctcgagcggctgctcgaggtgctgcgcacccaccccgggatg
tcggagatccacttccgcgtcgcgcaggtccgcgggggcaccgcgctggtcatgccgaac
ggcggctggcgggtcgagcgttcacccgcgctgtacggcgacctgaaggcgctgctcggc
ccgggctgcctcgagtcggcgaccaccccggtcggcgtctag
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