Cellulomonas sp. C5510: K5O09_11935
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Entry
K5O09_11935 CDS
T08459
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
celc
Cellulomonas sp. C5510
Pathway
celc02020
Two-component system
celc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
celc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K5O09_11935 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K5O09_11935 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
celc03021
]
K5O09_11935 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
celc02035
]
K5O09_11935 (whiG)
Transcription machinery [BR:
celc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K5O09_11935 (whiG)
Bacterial motility proteins [BR:
celc02035
]
Flagellar system
Flagellar assembly proteins
Stator
K5O09_11935 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
CENP-B_N
HTH_28
GerE
KORA
DUF2730
Motif
Other DBs
NCBI-ProteinID:
QZN84556
LinkDB
All DBs
Position
complement(2577062..2578087)
Genome browser
AA seq
341 aa
AA seq
DB search
MSVPAEVTAPVAVPDRAAWAPLGVIPRQHALEECLGVESELVLAPADVDAVDVLGSTDVL
DADLDVAVVRLAAVDDPAAPEDLDAPAVDPVAEDWLLFKAGGDRLVRERLILHYAPLVTA
VAGRVGMRLPAMVEHADLVSYGMFGLIDAIEKYEPGRSVKFETYAGARIRGAIIDELRAM
DWIPRSVRTKARAVDRAYAELESELHRVPTEGEVAARLGMDIRDLRALFTQLSTVNVAAL
DELLGAGEERGDRLSLLDTLGDDSTPDPESSFEAQETRFLLARAIDQLGEREKLVLVLYY
YEGMTLAEIGRVLGVTESRISQMHTAAMLRLRARLTEADRG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtccctgctgaggtcaccgcccccgtggcggtgcccgaccgcgccgcctgggcg
ccgctgggcgtcatcccgcgtcagcacgcgctggaggagtgcctcggcgtggagagcgag
ctcgtgctcgcccccgccgacgtggacgcggtcgacgtgctcgggagcacggacgtcctg
gacgccgatctcgacgtcgccgtggtgcgcctcgccgcggtggacgacccggctgcgccc
gaggacctcgacgccccggcggtcgacccggtggcggaggactggctcctgttcaaggcg
ggcggcgaccggctcgtgcgggagcggctcatcctgcactacgcgccgctcgtgaccgcc
gtggcggggcgcgtcgggatgcggctgccggcgatggtcgagcacgcggacctcgtgtcc
tacgggatgttcgggctcatcgacgccatcgagaagtacgagccgggccggtcggtgaag
ttcgagacgtacgccggcgcgcggatccgcggcgcgatcatcgacgagctgcgggccatg
gactggatcccgcggtcggtccggacgaaggcccgcgctgtcgaccgcgcctacgcggag
ctggagagcgagctgcaccgcgtgcccaccgagggcgaggtcgcggctcgtctcggcatg
gacatccgggacctgcgggccctgttcacgcagctctcgacggtgaacgtcgcggcgctc
gacgagctgctgggtgccggtgaggagcggggtgaccggctgtcgctgctggacacgctc
ggtgacgacagcacgccggaccctgagagctcgttcgaggcgcaggagacgaggttcctg
ctggcccgcgcgatcgaccagctcggcgagcgggagaagctcgtcctcgtcctgtactac
tacgagggcatgacgctcgcggagatcgggcgggtgctcggcgtgaccgagtcgcgcatc
tcgcagatgcacaccgcggcgatgctgcgtctccgtgcccgcctcacggaggccgaccgc
ggctga
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