Cellulomonas sp. C5510: K5O09_14960
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Entry
K5O09_14960 CDS
T08459
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
celc
Cellulomonas sp. C5510
Pathway
celc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
celc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K5O09_14960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
celc03021
]
K5O09_14960
03400 DNA repair and recombination proteins [BR:
celc03400
]
K5O09_14960
Enzymes [BR:
celc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K5O09_14960
Transcription machinery [BR:
celc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K5O09_14960
DNA repair and recombination proteins [BR:
celc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K5O09_14960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SLATT_2
Motif
Other DBs
NCBI-ProteinID:
QZN85077
LinkDB
All DBs
Position
complement(3250125..3253991)
Genome browser
AA seq
1288 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEEGRHEDLPNLQNEIDLEKKEIADRRDNDINTRAQKLEAD
LAELEAEGAKADARRKVRDSADREMAQIRKRADAEIERLDTIWDKFKNLKVADLEGDELL
YRQLQDRYGNYFEGSMGAAAIQKRLEAFDLDAEAESLREIIRTGKGQRKTRALKRLKVVN
AFLTTTNSPTGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCGAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLFHLTSDKEEPVGAGR
SFSSVAEAIMAFDQGSLDLNAVVRIRMDGLVFAPGAEPEGFVADQPFLFETTLGRALFNE
LLPVDYPYENGVVDKKRLSVIVNDLAERYPKVEVAASLDALKEAGFRWATRSGVTIAISD
VAAPTAKAEILTEHEARAAKVQGQYDKGLITDDERRQELIEIWTQATDKVAKAMQENFSA
RNTVFRMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTERGLTLPIAVELGGSFRRHDKV
ETSVYARTLAVDVEIDGEVVGRAGEDVGDVLLDRLVAAGVTELKVRSVLTCESRVGTCAK
CYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAEDITQGLPRVQELF
EARTPKGESPIAEFSGRITIDEADRTRRIVLTPDDGSEEIAYPITKRSRLLVSDGDHVEV
GTQLVQGAVDPKKVLRILGPRATQKHLVDEVQEVYNSQGVDIHDKHIEVIVRQMLRRVTV
LDSGDTDLLPGELAERGRFEDANRRAVAEGGQPASGRPELMGITKASLATDSWLSAASFQ
ETTRVLTEAAMSGRSDPLLGLKENVILGKLIPAGTGLPRYHEVTVEPTEEAKAELYPSFG
YDEIDFPALGLGSGEAIPLEDIDFGDFR
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgacgagctgcgcatcggcctggccacggccgacgacatc
cgtgcctggtcgcacggcgaggtgaagaagcccgagaccatcaactaccggaccctgaag
ccggagaaggacgggctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgctcgaaggtccgccgtgagcgcatgggccacatcgagctggccgcgccc
gtcacgcacatctggttcttcaagggcgtgccctcgcgcctcggctacctgctggacctg
gcgccgaaggacctggagaaggtcatctacttcgcggcctacatgatcacgtgggtcgac
gaggagggccgtcacgaggacctcccgaacctccagaacgagatcgacctggagaagaag
gagatcgcggaccgccgcgacaacgacatcaacacccgcgcgcagaagctcgaggccgac
ctggccgagctcgaggccgagggtgcgaaggcggacgcccgccgcaaggtgcgcgactcc
gcggaccgcgagatggcgcagatccgcaagcgcgcggacgccgagatcgagcggctcgac
accatctgggacaagttcaagaacctcaaggtcgcggacctcgagggcgacgagctgctg
taccgccagctccaggaccgctacggcaactacttcgagggctcgatgggcgccgcggcg
atccagaagcgcctcgaggcgttcgacctggacgccgaggccgagtcgctgcgcgagatc
atccgcaccggcaagggtcagcggaagacccgcgcgctcaagcgcctcaaggtcgtcaac
gcgttcctcaccacgacgaactcgccgaccggcatggtgctggacgccgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggcggccggttcgccacgtcggacctg
aacgacctgtaccgccgcgtcatcaaccggaacaaccgcctcaagcggctcctggacctg
ggcgcgccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtggactcg
ctgttcgacaacggccgccgcggccgcccggtcacgggccccggcaaccgcccgctgaag
tcgatctccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggcgaagcgcatggtcgagcgcgcgcgc
ccggtcgtgtgggacgtgctcgaggaggtcatcaccgagcacccggtgctgctgaaccgt
gcgcccacgctgcaccgcctgggcatccaggcgttcgagccgcagctcgtcgagggcaag
gcgatccacctgcacccgctcgtctgcggcgcgttcaacgccgacttcgacggtgaccag
atggccgtccacctgcccctgagcgcggaggcgcaggccgaggcccgcatcctcatgctc
tcgagcaacaacatcctgaagccgtccgacggccgccccgtgaccatgccctcgcaggac
atgatcatcggcctgttccacctgacctccgacaaggaggagccggtgggtgccggtcgg
tcgttcagctcggtcgccgaggcgatcatggcgttcgaccagggttcgctggacctcaac
gcggtcgtgcggatccggatggacggcctggtgttcgcgccgggtgccgagcccgagggc
ttcgtcgcggaccagccgttcctgttcgagacgacgctgggccgggcgctgttcaacgag
ctgctgcccgtcgactacccgtacgagaacggcgtggtcgacaagaagcggctgtccgtg
atcgtcaacgacctggcggagcggtacccgaaggtcgaggtcgccgcgtcgctggacgcc
ctgaaggaggccggcttccgctgggccacccgctcgggcgtgacgatcgccatctcggac
gtcgcggcgccgacggccaaggcggagatcctcacggagcacgaggcgcgtgcggcgaag
gtgcagggccagtacgacaagggcctcatcaccgacgacgagcgtcgccaggagctcatc
gagatctggacgcaggccaccgacaaggtcgccaaggccatgcaggagaacttctccgcc
cggaacaccgtgttccgcatggtcggctcgggtgcgcgtggtaactggatgcaggtccgt
cagatcgccggtatgcgcggcctcgtggcgaacccgaagggcgagatcatcccccgcccg
atcaagtccaactaccgcgagggcctgtcggtcctggagtacttcatcgcgacgcacggc
gcccgcaagggtctggcggacaccgcgctgcggaccgccgactcgggctacctgacccgt
cgtctggtggacgtctcccaggacgtcatcgtccgcgaggacgactgcggcaccgagcgc
ggcctcacgctgccgatcgccgtcgagctcggcggctcgttccgccggcacgacaaggtg
gagaccagcgtgtacgcccggaccctcgcggtcgacgtcgagatcgacggcgaggtcgtg
ggccgtgcgggcgaggacgtcggcgacgtgctgctggaccgcctcgtggcggccggcgtc
accgagctgaaggtccgctccgtgctgacctgcgagtcgcgcgtcggcacctgcgcgaag
tgctacggccgctcgctggccaccggcaagctcgtcgacatcggcgaggccgtcggcatc
atcgcggcgcagtcgatcggtgagcccggcacccagctgacgatgcggacgttccacacc
ggtggtgtggcctccgcggaggacatcacgcagggtctgccgcgtgtccaggagctcttc
gaggcccgcacccccaagggtgagagccccatcgcggagttctcgggccgcatcaccatc
gacgaggccgaccgcacccgccgcatcgtcctcaccccggacgacggctccgaggagatc
gcctacccgatcaccaagcgctcgcgcctgctggtctcggacggcgaccacgtcgaggtc
ggcacccagctcgtccagggcgccgtggacccgaagaaggtcctgcgcatcctcggcccg
cgtgcgacgcagaagcacctggtcgacgaggtgcaggaggtctacaactcccagggtgtg
gacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcggcgcgtgaccgtg
ctcgactcgggtgacacggacctgctgccgggtgagctggccgagcgcggccggttcgag
gacgcgaaccgccgggcggtcgccgagggcggtcagccggcctcgggtcgtccggagctg
atgggcatcacgaaggcgtcgctcgcgacggactcgtggctgtcggcggcgtccttccag
gagacgacgcgcgtcctcaccgaggccgcgatgtcgggccgttccgacccgctgctgggc
ctgaaggagaacgtcatcctcggcaagctgatccccgccggcaccggcctgccccggtac
cacgaggtgacggtcgagccgaccgaggaggcgaaggccgagctgtacccgtccttcggc
tacgacgagatcgacttccccgccctgggcctcggctcgggcgaggcgatcccgctcgag
gacatcgacttcggcgacttccgctga
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integrated database retrieval system
