Cellulomonas sp. H30R-01: GXP71_03240
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Entry
GXP71_03240 CDS
T06411
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
celh
Cellulomonas sp. H30R-01
Pathway
celh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
celh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GXP71_03240 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
celh03400
]
GXP71_03240 (recD)
Enzymes [BR:
celh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GXP71_03240 (recD)
DNA repair and recombination proteins [BR:
celh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GXP71_03240 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
AAA_11
RecD_N
Viral_helicase1
AAA_22
Helicase_RecD
UvrD-helicase
SH3_13
PhoH
AAA_28
AAA_33
Phageshock_PspD
AAA_16
TraI_hel_assoc_N
MeaB
nSTAND3
Mg_chelatase
NTPase_1
AAA
SRP54
SLFN-g3_helicase
AAA_5
NPHP3_N
DO-GTPase1
CbiA
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QHT58204
UniProt:
A0A6C0FS40
LinkDB
All DBs
Position
complement(734955..736772)
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AA seq
605 aa
AA seq
DB search
MWDGDPDPRVPWRVDGLLARFVAAGALVSADVHVARRLGAIGGEPDERVHLAVALAVASV
RSGSVCVDLTSAPAAVATDLGDRDPVGAADLPWPALDGPDGWRAAVRRSPLVADGATGPD
DRPVRLVDDRVYLDRYWRDELAVRREVEARVRTTLPVDRSSLDDVVRRLFPDDADEQQRE
AVRVASGSLLTVLTGGPGTGKTTTVARLVAALQAVVGPDLRVALAAPTGKAASRLQESVN
AEVEGLPDADRDRVGTLAASTLHRLLGRRPGSSTRFRHDRTRRLPYDVVVVDESSMVSLP
LMARLVEALRPGARLVLVGDPDQLASVEAGAVLGDLVEALHGRAVVRLTRTHRFGHELGG
LAAAIREGDADRTLALLRAGGAHVHLTETAGDVAAPHELVGLRRDLEDAGRALVAAARSG
DAAGALRALGRHRLLLAHREGPAGVAHWAAQAEAWVEGVTGGRPDDGPWPPGRPLLVTEN
DATSGLSNGDTGVVVRDLGGEVADASDGAVVVAFGDAERPHLVRPHRLPAVQTVHAMTVH
RGQGSQFTRVTVLLPPAASPLLTRELLYTAVTRARDSVHVIGSEAAVRAAVERPVRRASG
LRHAL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtgtgggacggtgacccggacccgcgggtgccgtggcgcgtcgacggtctgctcgcgcgg
ttcgtcgcggcgggcgcgctcgtgtcggcggacgtgcacgtcgcgcgtcggctcggcgcg
atcggcggtgagcccgacgagcgggtgcacctcgcggtcgcgctggcggtcgcgtcggtg
cggtcgggctcggtgtgcgtcgacctgacgtcggccccggcggcggtcgcgacggacctg
ggcgaccgcgacccggtcggcgccgcggacctgccgtggccggcgctcgacggtccggac
gggtggcgcgccgcggtccggcgcagtccgctcgtcgcggacggcgcgaccggcccggac
gaccggcctgtgcggctcgtcgacgaccgcgtctacctggaccggtactggcgcgacgag
ctcgccgtccgccgcgaggtcgaggcccgcgtccgcacgacgctgccggtcgaccggtcg
tccctcgacgacgtcgtgcggcgactgttccccgacgacgccgacgagcagcagcgtgag
gcggtccgggtcgcgtcgggctcgctgctgacggtcctcaccggcggtccggggacgggg
aagacgacgacggtcgcccggctcgtcgccgcgctccaggcggtggtcggtccggacctg
cgggtcgcgctcgcggcacccacgggcaaggccgcctcacgtctccaggagtcggtgaac
gccgaggtggaagggctgccggacgccgaccgggaccgcgtcggcacgctcgccgcgtcg
acgctgcaccgcctgctgggccgccgccccgggagctcgacccggttccggcacgacagg
acgcggcgcctgccctacgacgtcgtcgtggtcgacgagtcctcgatggtgtcgctgccc
ctcatggcgcggctcgtcgaagccctgcgacctggggcgcggctggtgctcgtcggcgac
cccgaccagctcgcgagcgtcgaggcgggcgcggtcctcggcgacctcgtggaggcgttg
cacggccgggcggtcgtgcggctcacccggacccaccggttcgggcacgagctcgggggt
ctcgccgctgcgatccgggagggcgacgcggaccggacgctcgcgctgctgcgcgcgggc
ggtgcgcacgtgcacctcaccgagacggcgggcgacgtcgcggcgccgcacgagctcgtg
gggctgcgacgcgacctcgaggacgcgggtcgggcgctcgtcgcggccgcacgttccggg
gacgccgccggggccctgcgcgcgctcggacggcaccgcctgctgctcgcgcaccgggag
gggcctgcgggcgtcgcgcactgggcggcgcaggccgaggcctgggtcgagggcgtgacc
ggcggacgaccggacgacggtccgtggccgccgggacggccgttgctcgtgacggagaac
gacgcgacgagcggcctgtcgaacggcgacaccggcgtcgtcgtccgcgacctcggcggc
gaggtggccgatgcgtccgacggggcggtcgtggtcgcgttcggcgacgccgagcggccg
cacctggtgcgaccgcaccggctgcccgccgtgcagacggtccacgcgatgaccgtgcac
cgcgggcagggcagccagttcacgcgcgtcacggtgctcctgccgcccgcggcctccccc
ctgctgacgcgcgagctgctgtacacggccgtgacgcgcgcgcgggactcggtgcacgtc
atcggctcggaggcagcggtgcgtgccgcggtcgagcgcccggtccggcgcgcgagcggc
ctgcggcacgcgctctag
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