Cellulomonas sp. H30R-01: GXP71_11400
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Entry
GXP71_11400 CDS
T06411
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
celh
Cellulomonas sp. H30R-01
Pathway
celh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
celh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GXP71_11400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
celh03021
]
GXP71_11400
03400 DNA repair and recombination proteins [BR:
celh03400
]
GXP71_11400
Enzymes [BR:
celh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GXP71_11400
Transcription machinery [BR:
celh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GXP71_11400
DNA repair and recombination proteins [BR:
celh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GXP71_11400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QHT56629
UniProt:
A0A6C0FNV8
LinkDB
All DBs
Position
complement(2553638..2557507)
Genome browser
AA seq
1289 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEEGRHEDLPNLQNEIDLEKKEIADRRDNDINARALKLETD
LAELEAEGGKADARRKVRDSAEREMAQIRKRADADLERLENVWDRFKNLKVADLEGDELL
YRQLQDRYGNYFEGSMGAAAIQKRLEAFDLEAESDNLREIIKTGKGQRKTRALKRLKVVN
AFLTTNNSPTGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLYHLTSDRLEGAEGAG
RAFSSVSEAIMAFDQGTLDLNAVVKIRFDDLVLSEDDAPEGWSEGDTLLFETTLGRALFN
ELLPVDYPYENGVVDKKRLSAIVNDLAERYPKVAVAASLDALKEAGFRWATRSGVTISIS
DVATPAAKKDILEEHEARAAKVQGQYDKGLITDDERRQELIEIWTQATDKVAKAMQENFP
ARNTVYRMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKANYREGLSVLEYFIATH
GARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTERGLTMPIGVPGTDGLRRHDK
VETSVYSRTLATDIEVDGELIGHAGDDVGDVLLDRLLESGVDTLKVRSVLTCESRVGTCA
KCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVQEL
FEARTPKGEAPIAEFSGRIAIEEGDRSRRIVLTPDDGSEEIAYPITKRSRLLVNDGDHVA
VGTQLVQGAVDPKKVLRILGPRATQKHLVDEVQEVYRSQGVDIHDKHIEVIVRQMLRRVT
VLDSGTTDLLPGELAERGRFEDANRKAVSEGGQPASGRPELMGITKASLATDSWLSAASF
QETTRVLTEAAMSGRSDPLLGLKENVILGKLIPAGTGLPRYRNITVEPTEEAKAELYPTF
GYDEIDFPALGLGSGEAIPLEDIDFGDFR
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgacgagctgcgcatcggcctggccacggccgacgacatc
cgtgcgtggtcgcacggtgaggtgaagaagcccgagaccatcaactaccggaccctgaag
ccggagaaggatggcctgttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggtgtc
gaggtcacgcgctccaaggtgcgccgtgagcgcatgggtcacatcgagctcgccgccccg
gtgacgcacatctggttcttcaagggtgtgccgtcgcgtctgggctacctgctcgacctg
gcgcccaaggacctcgagaaggtcatctacttcgcggcctacatgatcacgtgggtcgac
gaggagggccggcacgaggacctcccgaacctccagaacgagatcgacctggagaagaag
gagatcgcggaccgccgcgacaacgacatcaacgcccgcgcgctcaagctcgagaccgac
ctggccgagctcgaggccgagggcggcaaggccgacgcgcgccgcaaggtccgcgactcg
gccgagcgtgagatggcccagatccgcaagcgtgcggacgcggacctcgagcgtctcgag
aacgtgtgggaccgcttcaagaacctcaaggtcgcggacctcgagggcgacgagctgctc
taccgccagctgcaggaccgctacggcaactacttcgagggctcgatgggcgccgcggcg
atccagaagcgtctcgaggcgttcgacctcgaggcggagtccgacaacctgcgcgagatc
atcaagacgggcaagggccagcgcaagacgcgtgccctcaagcgtctgaaggtcgtcaac
gcgttcctcacgacgaacaactcgccgacgggcatggtcctcgacgcggtcccggtcatc
ccgccggacctgcgcccgatggtccagctcgacggcggccgcttcgccacgtcggacctg
aacgacctgtaccgccgcgtcatcaaccggaacaaccgcctcaagcggctcctggacctg
ggcgcgccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtggactcg
ctgttcgacaacggccgtcgcggtcgcccggtcacgggccccggcaaccgtccgctgaag
tcgatctccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggcctgcccaagcagatggcgctcgagctcttcaagccgttcgtcatgaagcggctc
gtggacctcaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcgcccgc
ccggtcgtgtgggacgtgctcgaggaggtcatcaccgagcacccggtgctgctgaaccgt
gcgcccacgctgcaccgtctgggcatccaggcgttcgagccgcagctcgtcgagggcaag
gcgatccacctgcacccgctcgtctgcgccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgcccctgagcgcggaggcgcaggccgaggcccgcatcctcatgctc
tcgagcaacaacatcctgaagccgtcggacggccgtccggtgaccatgccctcgcaggac
atgatcatcggcctgtaccacctgacgtcggaccggctcgagggtgcggagggcgccggc
cgcgcgttcagctcggtctccgaggcgatcatggcgttcgaccaggggacgctcgacctc
aacgcggtcgtgaagatccggttcgacgacctggtgctgtccgaggacgacgcccccgag
ggctggtccgagggcgacacgctgctgttcgagacgacgctcggccgtgcgctcttcaac
gagctgctgccggtcgactacccgtacgagaacggcgtggtcgacaagaagcgcctctcg
gcgatcgtcaacgacctcgccgagcgctacccgaaggtcgccgtcgcggcgtccctcgac
gcgctcaaggaggccggcttccgctgggcgacgcgctccggcgtgacgatctcgatctcc
gacgtcgcgaccccggccgcgaagaaggacatcctcgaggagcacgaggcgcgggccgcc
aaggtccagggccagtacgacaagggtctgatcacggacgacgagcgccgtcaggagctc
atcgagatctggacccaggccacggacaaggtcgccaaggcgatgcaggagaacttccct
gcccgcaacacggtgtaccgcatggtcggctcgggtgcgcgtggcaactggatgcaggtc
cgccagatcgcgggcatgcgtggtctggtcgccaacccgaagggcgagatcatcccgcgc
ccgatcaaggcgaactaccgcgagggcctgtccgtcctcgagtacttcatcgcgacgcac
ggtgcccgcaagggtctggcggacaccgctctgcggaccgccgactcgggctacctgacg
cgtcgtctggtggacgtctcgcaggacgtcatcgtccgcgaggaggactgcggcaccgag
cgtggcctgacgatgccgatcggcgtcccgggaacggacgggctgcgtcgtcacgacaag
gtcgagacgagcgtctactcgcgcacgctggcgacggacatcgaggtcgacggcgagctc
atcggccacgccggtgacgacgtcggcgacgtcctcctggaccgcctgctcgagtcgggc
gtcgacacgctcaaggtgcgctccgtgctcacctgcgagtcgcgcgtcggcacgtgcgcg
aagtgctacggccgttcgctcgcgacgggcaagctcgtcgacatcggcgaggccgtcggc
atcatcgcggcgcagtcgatcggtgagcccggcacccagctgacgatgcggacgttccac
accggtggtgtggcctcggccgacgacatcacgcagggtctgccgcgtgtccaggagctc
ttcgaggcccgcacccccaagggtgaggcgcccatcgcggagttctcgggccgcatcgcg
atcgaggagggtgaccgctcgcggcgcatcgtcctgacgccggacgacggctcggaggag
atcgcctacccgatcacgaagcgctcgcgcctgctggtgaacgacggagaccacgtcgcg
gtcggcacgcagctggtccagggcgccgtcgaccccaagaaggtgctgcgcatcctcggc
ccgcgtgccacgcagaagcacctggtcgacgaggtgcaggaggtctaccgctcccagggc
gtggacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcggcgcgtgacg
gtcctcgactccggcaccacggacctgctgcccggcgagctcgccgagcgcggccggttc
gaggacgcgaaccgcaaggccgtgtccgagggtggtcagccggcgtcgggtcgtcccgag
ctcatgggcatcacgaaggcgtcgctcgcgacggactcgtggctgtcggcggcctccttc
caggagacgacgcgcgtcctcaccgaggccgcgatgtcgggtcgttccgacccgctcctg
ggcctcaaggagaacgtcatcctcggcaagctcatccccgccggcacgggcctgccccgc
taccggaacatcacggtggagccgaccgaggaggcgaaggccgagctgtacccgaccttc
ggctacgacgagatcgacttccccgccctgggcctcggctcgggcgaggcgatcccgctc
gaggacatcgacttcggcgacttccgctga
DBGET
integrated database retrieval system
