Cellulomonas sp. H30R-01: GXP71_14470
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Entry
GXP71_14470 CDS
T06411
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
celh
Cellulomonas sp. H30R-01
Brite
KEGG Orthology (KO) [BR:
celh00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GXP71_14470
Enzymes [BR:
celh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
GXP71_14470
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FIMAH
FG-GAP
FG-GAP_3
TcdB_toxin_midN
Motif
Other DBs
NCBI-ProteinID:
QHT57163
UniProt:
A0A6C0FPI9
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All DBs
Position
complement(3238678..3241269)
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AA seq
863 aa
AA seq
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MSLPRLHGRLAAATGTAALLVGCLAVPSVAAPGVPATGAQGARHDGPDRLTLERLDRGLV
AATTGQGVFLSWRLLAPEVTGATATGQTGPDFAVYRDGTKIATVADSTNYLDASGTAGSR
YRVAAVVDGVEVDGADASPWAQASVDIPLKKPADGVTPVGEAYTYSANDMSVADVDGDGA
YEYVVKWDPSNSKDVSQVGYTGNVYVDAYELDGTQLWRIDLGVNIRAGAHYTQFPVYDFD
GDGKAELMMKTAPGSKITTYRADGTVRSEKYVSIPKDDRKAGVTDTTDYRLSKQGYYEHV
VEMFTGWATRPEVTSGQWPATLEEAFGIAPQYTYPLSDADARALTDYFMDVYAPSRSARN
VLRNFEGFVVDGPEYLTVFAGDTGKELQTVDYKPGRGDDGLLWGDYAMARIEPGNRVDRF
LSGVGYFDGKTPSAVFARGYYTRTTVVAYDWDGKSLKERWYVDSGHVPLTNPFNDGPHGR
DGTDPEFGTITTQGFHSLSVADVDADGRQELVYGSATIDDDGSLLYSSFDTLPAGSADPG
AVVRLGHGDAMHVTDIDPDRPGLEIFTAHEGATFAPYGMAMRDAATGEVLFGVYSGRDTG
RSMIGDVLPGTRGLEAWASLPGGTNSLGLYSASGVVTPGPIPGTNQSIRWAGDGTTQIVN
GSGDQDVTIDDWTRGRLLTATGTRANNGTKGNPSLVADVLGDWREELLVRTADSSAIRMF
VSTEVTSHKLATLMHDPQYRAEVARQQTTYNQPSYPGFYLASDTDYTQVPVADFWAPGSI
DALESAVKARIDAREIRGPVAAVLLAAVKTADVAADHGNEKIAVKSLEAFVTALTPKSRV
SSVSDSARVALTHQAEQVAAMLD
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttccccgtctccacggccgcctcgccgcggccaccgggaccgcagccctgctc
gtcggctgcctcgccgtgccgtccgtcgccgcccccggggtgcccgcgacgggtgcgcag
ggcgcgaggcacgacgggcccgaccgcctcacgctcgagcggctcgaccgcggcctcgtc
gccgcgaccaccggccagggcgtgttcctgtcgtggcggctgctcgcccccgaggtcacg
ggcgcgaccgccaccggccagaccggccccgacttcgccgtctaccgggacggcacgaag
atcgccacggtcgccgactcgacgaactacctcgacgcgtccggcaccgccgggtcgcgc
taccgcgtcgcggccgtcgtcgacggggtcgaggtcgacggcgccgacgcgagcccgtgg
gcgcaggcgtcggtcgacatcccgctgaagaagcccgcggacggggtcacgcccgtcggc
gaggcgtacacgtactccgcgaacgacatgagcgtcgcggacgtcgacggcgacggcgcg
tacgagtacgtcgtcaagtgggacccgtcgaactccaaggacgtcagccaggtcgggtac
acgggcaacgtctacgtcgacgcgtacgagctcgacggcacgcagctgtggcgcatcgac
ctcggcgtgaacatccgcgcgggcgcgcactacacgcagttccccgtgtacgacttcgac
ggcgacggcaaggccgagctcatgatgaagacggcgccgggctcgaagatcacgacctac
cgcgccgacgggaccgtgaggtcggagaagtacgtctcgatcccgaaggacgaccgcaag
gccggcgtgaccgacacgaccgactaccggctcagcaagcagggctactacgagcacgtc
gtcgagatgttcacgggctgggcgacgcggcccgaggtcacgtccgggcagtggcccgcg
acgctcgaggaggccttcggcatcgcgccgcagtacacctacccgctgtccgacgccgac
gcccgcgcgctcaccgactacttcatggacgtgtacgcgccgagccgcagcgcgcgcaac
gtgctgcgcaacttcgagggcttcgtcgtcgacggccccgagtacctcacggtcttcgcc
ggcgacaccggcaaggagctccagacggtcgactacaagccgggtcgcggggacgacggc
ctgctgtggggcgactacgcgatggcccgcatcgagcccggcaaccgcgtcgaccggttc
ctgtccggcgtcggctacttcgacgggaagaccccgtcggcggtgttcgcgcgcggctac
tacacgcgcacgaccgtcgtcgcgtacgactgggacggcaagagcctgaaggagcggtgg
tacgtcgactccgggcacgtgccgctgacgaacccgttcaacgacggcccgcacggacgc
gacggcaccgaccccgagttcggcaccatcacgacgcagggcttccactcgctgtcggtc
gcggacgtcgacgccgacggccgtcaggagctcgtctacggctccgcgacgatcgacgac
gacggttcgctgctgtactcgtcgttcgacaccctgcccgcgggcagcgccgacccgggc
gcggtcgtccggctcgggcacggcgacgcgatgcacgtgaccgacatcgaccccgaccgc
cccggcctggagatcttcaccgcgcacgagggcgccacgttcgcgccctacggcatggcg
atgcgcgacgccgcgaccggcgaggtgctgttcggcgtctactccggccgcgacacgggc
cggtcgatgatcggcgacgtcctgcccggcacgcgtggtctggaggcgtgggcgtcgctg
cccggcggcacgaactcgctcggcctctactccgcgtccggcgtcgtcacgcccggcccg
atccccggcaccaaccagtcgatccgctgggccggcgacggcaccacgcagatcgtcaac
gggtccggcgaccaggacgtgacgatcgacgactggacccgcggccgactgctcaccgcg
accggcacccgggcgaacaacggcaccaagggcaacccgtcgctcgtcgccgacgtcctc
ggcgactggcgcgaggagctcctggtccgcaccgccgactcctcggcgatccggatgttc
gtgtccaccgaggtgacgagccacaagctcgcgaccctcatgcacgacccgcagtaccgg
gccgaggtcgcgcgccagcagacgacgtacaaccagccgtcgtaccccgggttctacctc
gcgtccgacaccgactacacgcaggtgcccgtcgcggacttctgggcgcccggcagcatc
gacgccctcgagtcggccgtgaaggcccggatcgacgcccgcgagatccgcggacccgtc
gccgccgtcctgctcgcggccgtcaagaccgccgacgtcgcggccgaccacggcaacgag
aagatcgccgtgaagtcgctcgaggcgttcgtcacggcgctcacgccgaagagccgcgtg
tcgagcgtctcggacagcgcccgggtcgcgctgacgcaccaggcggagcaggtcgccgcg
atgctcgactga
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