Cellulomonas sp. H30R-01: GXP71_19735
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Entry
GXP71_19735 CDS
T06411
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
celh
Cellulomonas sp. H30R-01
Pathway
celh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
celh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GXP71_19735
09124 Replication and repair
03420 Nucleotide excision repair
GXP71_19735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
celh03021
]
GXP71_19735
03400 DNA repair and recombination proteins [BR:
celh03400
]
GXP71_19735
Enzymes [BR:
celh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXP71_19735
Transcription machinery [BR:
celh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GXP71_19735
DNA repair and recombination proteins [BR:
celh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GXP71_19735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHT58091
UniProt:
A0A6C0FRK6
LinkDB
All DBs
Position
complement(4432740..4434386)
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AA seq
548 aa
AA seq
DB search
MTNGPLIVQSDKTLLLEVDHDQADACRRAIAPFAELERAPEHVHTYRLTPLGLWNARAAG
HDAEQVVDVLLEYSRYPVPHALLVDVAETMSRYGRLQLVQHPVHGLVLHALDAAVLAEVM
RSKRTAGLLGARLDDTDVVVHPSERGHLKQVLLKLGWPAEDLAGYVDGEAHQIDLAQDGW
HLRPYQEHAVESFWHGGSGVVVLPCGAGKTLVGAGAMAKSSTTTLILVTNTVSARQWRDE
LVKRTTLTEDEIGEYSGARKEIRPVTIATYQVLTTKRKGVYTHLELLDARDWGLVVYDEV
HLLPAPIFRMTADLQARRRLGLTATLVREDGREDEVFSLIGPKRFDAPWKDIEAQGYIAP
ADCIEVRLTLPDHERMLYATAEPEDKYRLAATAAGKNRVVERLVAQHDGDQVLVIGQYLD
QLHELAEHIDADLITGETPVRERQRLFDAFRAGEIHKLVVSKVANFSIDLPEASVAIQVS
GSFGSRQEEAQRLGRIMRPKSDGKTAHFYTVVARDTVDQEFAAHRQRFLAEQGYAYSIVD
AEDLDVAQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaacggcccgctgatcgtgcagagcgacaagacgctgctgctcgaggtcgaccac
gaccaggccgacgcctgccggcgggccatcgcccccttcgccgagctggagcgagcaccg
gagcacgtgcacacgtaccggctgacgccgctgggcctgtggaacgcgcgcgccgcgggg
cacgacgccgagcaggtcgtcgacgtgctcctggagtactcgcgctacccggtgccgcac
gcgctgctcgtggacgtcgccgagaccatgtcgcggtacgggcggctgcagctcgtccag
caccccgtgcacggcctcgtgctgcacgcgctcgacgccgccgtcctcgccgaggtcatg
cggtcgaagcgcaccgccgggctgctcggcgcgcgcctcgacgacaccgacgtcgtggtg
cacccgtcggagcgcgggcacctcaagcaggtgctgctcaagctcggctggcccgccgag
gacctcgcgggctacgtcgacggcgaggcgcaccagatcgacctcgcgcaggacggctgg
cacctgcggccctaccaggagcacgcggtcgagtcgttctggcacggcgggtccggcgtc
gtcgtcctcccctgcggcgcgggcaagacgctcgtcggcgcgggggcgatggcgaagtcg
tcgacgacgacgctcatcctcgtgaccaacaccgtgtcggcgcggcagtggcgcgacgag
ctcgtgaagcgcacgacgctcaccgaggacgagatcggcgagtactcgggcgcccgcaag
gagatccgcccggtcaccatcgcgacctaccaggtgctgaccaccaagcggaagggcgtc
tacacgcacctcgagctgctcgacgcgcgcgactggggcctggtggtctacgacgaggtg
cacctgctgcccgcgccgatcttccgcatgacggccgacctgcaggcccgccgccgcctc
gggctcaccgcgacgctcgtccgcgaggacggccgcgaggacgaggtgttcagcctcatc
ggccccaagcggttcgacgcgccctggaaggacatcgaggcgcagggctacatcgcgccc
gccgactgcatcgaggtccgcctcacgctgcccgaccacgagcgcatgctctacgcgacc
gccgagcccgaggacaagtaccgcctcgccgcgaccgccgccgggaagaaccgcgtcgtc
gagcggctcgtcgcgcagcacgacggcgaccaggtgctcgtcatcggccagtacctcgac
cagctccacgagctcgccgagcacatcgacgccgacctcatcacgggcgagacgcccgtg
cgcgagcggcagcggctgttcgacgcgttccgcgccggcgagatccacaagctcgtcgtg
agcaaggtcgcgaacttctcgatcgacctgcccgaggcgtccgtcgcgatccaggtgtcc
gggtcgttcggctcccgccaggaggaggcgcagcgcctcggccggatcatgcgccccaag
tccgacggcaagaccgcgcacttctacacggtcgtcgcgcgcgacaccgtcgaccaggag
ttcgcggcccaccgccagcgcttcctggcggagcagggctacgcctactccatcgtcgac
gcggaggatctggacgtagcgcagtag
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