Cellvibrio sp. PSBB006: CBR65_02345
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Entry
CBR65_02345 CDS
T04891
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cell
Cellvibrio sp. PSBB006
Brite
KEGG Orthology (KO) [BR:
cell00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cell03021
]
CBR65_02345
Transcription machinery [BR:
cell03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CBR65_02345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
Tudor_RapA
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
TPR_ELP1
Motif
Other DBs
NCBI-ProteinID:
ARU26365
UniProt:
A0A1Y0FTB7
LinkDB
All DBs
Position
511971..514907
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AA seq
978 aa
AA seq
DB search
MSKVQYVIGQRWISESEAELGLGIVLDIANRRLTLSFPAAGERRTYAMDNAPVSRVIYQV
GEKVRRHDGVGITITRVVEQQGCLLYFGLTADKTELAFPEFELDSFVQFSTPRDRLFAGQ
IDKHTHFSLRYHTLNFLHKHQQSPVYGLAGPRVQLLPHQLYIASEVAARHAPRVLLADEV
GLGKTIEAGLILHQQLISGRVQRALIVVPTSLQHQWLVEMLRRFNLAFTLLDEARCQALT
GLDSDEISVDYIDDFRDDDSESTDTNVDNPFESAQLILCSLDFLTQHPQRYEQALACQWD
LLLVDEAHHLLWSETDPSLEYRCIEGLARIAKGLLLLTATPEQLGLDSHFARLRLLDPDR
YYDLEKFKAEQQAYQPINDLVQALLNAKQTGADIPANVLKDLEAFLPQEKIASLRQGTVE
DVTLAIDHTINDLLDRHGTGRVLFRNTRTSVSGFPERKLHEHPLQLPAPLDEVFEQFSLE
EQIRAEQFWQHEATQGWWLEDPRVEWLSDWLKQNRRQKVLVICADADTAQTLEEFLRLRK
GVLSAVFHEGLSLIERDRAAAYFADLEEGAQVLICSEIGSEGRNFQFAHHLVMFDLPLNP
DLLEQRIGRLDRIGQTQDVNIHVPYYEATAQQRLLQWYHQGLNAFEKTCAIGQAVMNRFG
EHLLPALVQHNAKDFEQLLDDASQFAEGLRVQLQQGRDRLLELNSCKPAQAAALVEHLAE
RDDDPDLIHYLEEIFEAFGVDSERHSEHSLVLHPGDHMRVPHFPGLSEDGVTVTFQRQQA
LSREDMQFLTWEHPLVRGAQELIALNEFGNTAFCTLKLPPLKPGTVMLEALFVLHCPAPA
ELQLFRYMPQSLIRVLLDSNGKDLSAVLGIDQVGKLLQKVPRNNAQEVVRQARPLLSTML
QQAEEKTHSKQAELIAAAQAQVSEQLNNELERMKALMQVNPNVRQSEIDYVQQRLAASQH
YLSQAKLRLDALRVIMIV
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaagtgcaatatgttatcgggcaacgttggatcagtgagtcggaagctgaattg
ggtttgggcattgtgctggatatcgccaaccggcgcttgaccctgagttttcccgctgcc
ggcgaacgtcgcacctatgccatggataatgcgccagtcagccgtgtgatctatcaggtt
ggtgagaaagtgcgtcgtcatgatggtgttggcatcaccattacccgtgtcgttgaacaa
caagggtgtttgttatatttcgggctgacggctgataaaaccgagttggcgttccccgaa
tttgaactcgatagtttcgtgcagttcagtacaccacgcgatcgcttgtttgccgggcag
attgataagcacacgcacttttcgttgcgttatcacacgctgaattttttacataaacat
cagcaatcaccggtatatggtttggcgggcccgcgtgtacagttgttgccgcatcagtta
tatattgccagtgaagtcgctgcgcgccatgcgccccgggttttgcttgccgatgaagtg
ggcttgggtaaaaccattgaggccggtttaattttgcatcagcaactgatcagtggacgc
gtccaacgagcgctgattgttgtgccgaccagcttgcagcaccagtggctggtggaaatg
ctgcgtcgttttaatctcgcgttcacactattggatgaagcccgttgtcaggcgctgaca
ggtttggacagcgatgaaatctctgtggattatatcgatgactttcgcgatgacgatagt
gagtctaccgatactaatgtggacaatccttttgaatcggcgcagttgattctttgctcg
ttggattttctgacacagcatccgcaacgttatgaacaggcactggcttgccagtgggat
ttgctgttggttgacgaagcgcaccatttactctggagcgaaactgatcccagcctggaa
tatcgctgtattgaagggttagctcgtatagccaaaggtttgttactgctgaccgcgaca
ccggaacagttgggtttggatagccattttgcccgtttgcgtttgcttgatcctgatcgc
tattacgatttggagaagttcaaggcagagcaacaagcctatcaacctatcaatgatctg
gtacaggcactgcttaatgccaaacaaactggtgccgatattccagctaatgtgctgaaa
gatctggaagcatttttgccgcaagaaaaaatagccagcttacgccagggcacagtggaa
gatgtgacgcttgctattgatcacacaataaatgatttgctcgatcggcacggcacaggg
cgcgttctgtttcgcaatacacgtacctctgtcagtggttttcccgagcgtaaactgcat
gagcacccgctgcaattacctgcacccttggacgaagtctttgaacagttttcactggaa
gagcaaatccgggctgagcaattctggcagcacgaggcaacccaggggtggtggttggaa
gatccgcgcgtggagtggctgagtgattggttaaagcaaaatcgccgacaaaaagttctg
gtcatttgtgccgatgctgatacggcccaaacgctggaagaattcctccgtttgcgtaaa
ggcgttttgtccgctgtattccatgaaggattgagcttaattgagcgggatcgcgcggct
gcttactttgccgacctggaagagggtgcccaggtgttgatttgttcggaaatcggtagc
gaagggcgcaactttcagtttgcccatcaccttgtaatgtttgatttacccttgaacccg
gatctgttggaacaacgcatcggtcgcctggaccggattggtcagactcaggacgttaat
attcatgtaccttattacgaggcgaccgcgcagcagcgtttattgcaatggtatcaccag
ggattaaatgcctttgaaaaaacctgcgctattggccaggcggtaatgaatcgttttggt
gaacatttattgcctgcattggtacagcacaacgcaaaagattttgaacaattgctggat
gacgcgagtcaatttgctgaagggctccgcgtgcaacttcagcagggacgtgaccggttg
ttggaattaaattcctgtaagccagctcaggcggcggcactggtggaacatttagccgag
cgggatgatgacccggatttaattcattatctggaagaaatctttgaagccttcggcgtg
gactctgaacggcatagcgaacacagcctggtacttcatcccggtgaccatatgcgggtg
ccgcactttccggggctatcggaggacggcgttaccgtaaccttccagcgccagcaggca
ttatcgcgcgaggacatgcagttcttaacctgggagcatccgttggtacgcggcgcccag
gagctgatcgctttaaacgaattcggcaacacggcattttgtactcttaaattgccgccg
ttgaagccgggcacggtgatgctggaagccttgtttgtcctgcactgtccggctcccgca
gaattgcagttgttccgttatatgccacaatcattgataagagtattacttgatagcaat
ggcaaagacctcagcgctgtcctgggtatagatcaagtgggcaagctgctgcaaaaagtg
ccgcgcaataatgcgcaggaagtggtacgtcaggcgcgcccattattaagtacgatgttg
cagcaggccgaagaaaagacgcattcaaagcaggcagagttaattgctgccgcgcaggct
caagtgagcgaacagctcaataacgagttggagcggatgaaagcgttgatgcaagtgaat
cctaatgtgcgtcaatcggaaattgattatgtgcaacaacgtttggcggcaagtcagcat
tatctctcgcaggcaaaactgcgtctggatgcgctgcgggtcatcatgattgtctag
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