Cellvibrio sp. PSBB006: CBR65_05030
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Entry
CBR65_05030 CDS
T04891
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cell
Cellvibrio sp. PSBB006
Pathway
cell00040
Pentose and glucuronate interconversions
cell01100
Metabolic pathways
cell02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cell00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CBR65_05030
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CBR65_05030
Enzymes [BR:
cell01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CBR65_05030
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Motif
Pfam:
Pectate_lyase_4
CBM_6
CBM_35
Endotoxin_C
Motif
Other DBs
NCBI-ProteinID:
ARU26843
UniProt:
A0A1Y0FUT2
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Position
complement(1220071..1221756)
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AA seq
561 aa
AA seq
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MCHLRLSAAVLALASASFMPVVSADVTIQENAPGFCSYDGVISTANNGYTGAGYVDIDNS
GGMGISYEVSVPASGSYAVSFRYANVGSTSAALVVNGSSGSLSFPRTTSLSAWNSVGKTV
NLHAGINQLRLRATGSQAIANIDAMTVLGNVSAGTCGGAASPSSVASSVAPPSSSSSAGQ
SSSSMPASSSLSSSSVVSSSVPASSTSSSSSSTPPIGEVPDFSMIGFATVPALGVPTTTG
GAAGQEVTVTTFEQLQQYVTASEPYVIRVQGMIQPPDQYVKLNVASNKSIIGVGDDAHLR
LIGFRVGGTSGCSDVYNPANEYVSNVIIRNLTFSDVYDTGSNPDADAVTIECFSHHVWVD
HNTFLYSAPSSSLMNRIDGAVDVKRGADWVTVSWNHFYQYNKTMLVGHVDSNAIQDAGRL
HVTYHHNYFENTHQRHPRVRFGKTHLFNNYVFNDRSGPNRQISYIALAGPQSELYLEANN
IQVDSGELYVISEDSDANAKVTFTNDNLVQLTNPNAEWILEVNNGLAFEPSEFYEYTINS
VDLLSTLVPQHAGAGNLALFE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatctacgtctgtcagctgccgttctggcactggcatcagcttcttttatgcct
gttgtttctgccgatgtgacgattcaggaaaatgcacccggcttttgcagttatgatggt
gttatcagtaccgctaacaacggttacaccggcgcgggctatgtcgatattgataatagc
ggtgggatgggtatttcctatgaagtcagcgtgcccgccagcggcagttatgctgtcagc
tttcgttatgccaatgtcggttctaccagcgcggcactggtggtcaacggttcgtccggc
agcttgtcgttcccacgcacaacgtctttgtctgcctggaacagtgttggtaaaacggtg
aacctgcatgcgggtattaatcaattgcgtctgcgtgcaaccggctcacaggctattgcc
aatattgatgcgatgacagtccttggtaatgtatccgccggtacctgtggtggggctgct
tcaccaagcagtgttgcttcgtcggttgcgccgccgtcttccagcagttcggcagggcag
tccagttccagtatgccggcgagttccagcctgtcatcaagttccgtggtttccagttcg
gttccggcttcatccacatcatcgagtagttccagcacaccaccgataggtgaagtaccg
gatttttccatgatcggttttgcaactgtgccggccttgggtgtgccgacaaccacgggt
ggggcagccgggcaggaagtaacggtaacgacatttgaacagttgcagcaatatgtcacc
gccagcgagccttatgtgattcgcgtgcagggtatgattcagccgccggaccagtatgtg
aaattaaatgtggcttccaacaaatccatcatcggtgtgggtgacgacgcgcacttgcgt
ttgatcggttttcgggtgggtggtaccagtggttgttccgatgtctataacccggccaat
gaatacgtttctaacgtgatcattcgcaacctgacattcagcgatgtatacgataccggt
tcaaatccggatgccgatgcggtcaccattgaatgtttttcacatcatgtgtgggtggat
cacaacacatttttatacagcgcgcctagttccagtttaatgaaccgcattgatggtgcc
gtggatgttaaacgcggtgccgattgggttacggtgtcctggaatcatttctaccagtac
aacaaaaccatgctggtggggcatgtggacagcaacgcaatacaagatgccgggcgattg
catgtgacctatcaccataattattttgaaaatacccaccagcgtcatccgcgtgtgcgg
tttggtaaaacgcatctctttaataattatgtctttaacgatagaagcggtcccaatcgg
cagatttcctatattgccctcgcgggtccgcaatccgagctttacctggaggctaataat
attcaggtggatagcggtgagttgtatgttatcagtgaagacagcgatgcaaatgcgaag
gtgacctttaccaacgataatctggtgcagttaactaatccgaacgccgaatggattctg
gaagtgaataatggtttggctttcgaaccatcggagttttatgaatatacgattaacagt
gtcgacttgctgtcgacattggtgccgcaacacgcgggtgccgggaatttggcattgttt
gagtaa
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