Cellvibrio sp. PSBB006: CBR65_05200
Help
Entry
CBR65_05200 CDS
T04891
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cell
Cellvibrio sp. PSBB006
Pathway
cell03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cell00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBR65_05200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cell03019
]
CBR65_05200
Enzymes [BR:
cell01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CBR65_05200
Messenger RNA biogenesis [BR:
cell03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CBR65_05200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_22
DsrH
HEM4
Motif
Other DBs
NCBI-ProteinID:
ARU26876
LinkDB
All DBs
Position
1259191..1260597
Genome browser
AA seq
468 aa
AA seq
DB search
MSFDSLGLRAELLRAIADEGYSTPTPIQLQAIPAVLNGGDILAAAQTGTGKTAGFTLPLL
EKLSQTTKTTNGRRPVRALILTPTRELAAQVYESVRTYGKYVPLRATVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLVQQNAVKLNELEVLVLDEADRMLDMGFIHDIKKVLALLPAK
RQNLLFSATFSDEIKALADKLLNRPTLIEVARRNTASERVTQRVHPVDRHRKRELLSYLI
GSGQWQQVLVFTRTKHGANRLTEQLMEDGISAAAIHGNKSQGARTKALEDFKRNTIRVLV
ATDIAARGIDIDQLPHVVNYELPNVPEDYVHRIGRTGRAECEGEAISLVCVDEQKFLHDI
ERLIKRDIEVVVLPGFEPDPSIKAEPIKLGRNMTIGRGNSGGGNGNGRNSNRKSGDRPKS
AQAPRKPGSSNSQHKKPAKTGSSVAKHTSAPKRAHSEHRGKTQASGNR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgattccctcggcttacgagccgaactgctgcgtgctattgctgatgaaggc
tacagcaccccgacacctattcaattacaagccattcctgccgtattaaacggtggggac
attctcgcagcggcacaaaccggtaccggtaaaaccgccggcttcaccttaccgctgctg
gaaaaactcagccaaaccacaaaaaccactaacggccgccgcccggtacgcgcactcatc
ctcacgcccacccgcgaattggcggcgcaagtgtatgaaagcgtacgcacctacggcaag
tacgtgcctttacgcgctacggttgtgtttggtggtgtttccattaatccacaaatgatg
aaattgcgcggcggcgtagatattctggtcgccacacccggacgtttgctagacctggtc
cagcaaaacgcggtgaaattaaatgagctggaagtactggtgctcgatgaagcggaccgc
atgctggacatgggttttatccacgacatcaaaaaagtcctcgcacttttgccagcaaaa
cgccagaacctgctgttttctgccaccttctctgacgagatcaaagcactggcggataaa
ctgttaaaccgccccaccttgatcgaagttgcgcgtcgcaacaccgcttctgagcgcgtc
acccaacgcgtacatccggtagatcgtcatcgcaaacgcgaattgctgtcgtacctgatc
gggtccggtcaatggcaacaggtgctggtgtttacccgtaccaaacacggcgctaaccgc
ttaacagaacaactgatggaagatggcatcagtgctgccgcgattcatggcaataaaagt
cagggcgcgcgaactaaagcattggaagatttcaagcgcaataccattcgtgtactggtt
gccacagacatcgccgcgcgcggtatcgacattgaccagttaccgcatgttgtgaattat
gaattgcccaatgtaccggaagattatgtgcaccgtatcggtcgtactggtcgcgcagaa
tgcgaaggagaagctatttcactggtgtgtgtggatgaacaaaaattcttgcacgatatt
gagcgattaattaagcgtgacattgaggttgtggtgttacccggtttcgaacctgacccc
agcatcaaagcagagccgatcaaattgggtcgcaacatgaccatcggtcgcggtaatagc
ggtggcgggaatggcaacggcagaaacagtaatcgcaagagcggtgaccggcctaaaagt
gcccaggcaccgcgcaaacctggttcctcaaactcccaacataaaaagccggcgaaaacc
ggttcttccgttgctaaacatacgtctgcacctaaacgtgctcactcagagcatcgggga
aagacgcaggcatctggtaatcgttga
DBGET
integrated database retrieval system
