Cellvibrio sp. PSBB006: CBR65_06555
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Entry
CBR65_06555 CDS
T04891
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cell
Cellvibrio sp. PSBB006
Brite
KEGG Orthology (KO) [BR:
cell00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cell03016
]
CBR65_06555
Enzymes [BR:
cell01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CBR65_06555
Transfer RNA biogenesis [BR:
cell03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CBR65_06555
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ARU27128
UniProt:
A0A1Y0FUN7
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All DBs
Position
complement(1576989..1578158)
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AA seq
389 aa
AA seq
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MLIPTEPIWIDQDTELARLCAQWRQQAAIAIDTEFMRSSTFYPIAGLIQVGDGKGCYLID
PIAIKDFAPLCELFLDEAVTKVLHSCSEDLEVFRRLLGIVPSPLFDTQVAAAFAGYGFSI
GYAGLVKAVLNTDIPKEETRSDWLQRPLSTAQLKYAALDVAHMLIVYGKLLQDLKTTQRL
QWVKDDCAELVTAARAAEDFNEAYQKVGFAWKLRPQELAILKALSIWRETEARMRDIPRN
RLIKEPALWEMARKQPQDMAALQRIPDIPHRTLQHDGETLLQLIRQTLQLNADAWPARLD
PPLAQKEGPLLKRLKNHVREQAEQLNLPPEILLRKKEYEAIIRSGMKGGTYVLPARLLGW
RHGVIGESLLRLAQEPIVPTSEPNHESDQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgttgattcccaccgaacccatctggatcgatcaggataccgagctggcccgcttgtgc
gcccaatggcggcaacaggccgctatcgcgattgataccgaatttatgcgcagcagtacc
ttttatcctatcgccggtttgatccaggtcggtgacgggaaaggttgttatctgattgac
ccgatcgcgatcaaagactttgcacccttgtgtgagctctttctggatgaggcggtcacc
aaggtattgcattcctgctccgaagatctggaagtatttcgccgcctgctcggcatagtg
ccgtcgccgttatttgatacgcaggttgctgctgcctttgcgggctatggtttttctatt
ggttatgcggggttggtcaaggcggtactcaataccgatattcccaaagaagaaacccgg
tccgattggttgcagcgtcctttaagtactgctcaactgaagtatgcggctctcgatgtg
gcgcacatgctgattgtctacggcaaactcttgcaagacctgaaaaccacccagcgtttg
caatgggtcaaagatgattgtgcggagctggtcactgccgcacgggcagcggaggatttc
aatgaggcctaccaaaaggtgggttttgcctggaagctgcgcccgcaggaactggcgata
ttaaaagcgctgagcatctggcgggaaacggaagcgcgcatgcgcgatattccgcgcaat
cgcttgatcaaggagccggcattatgggagatggcgcgcaagcagcctcaggatatggcg
gcactgcaacgcattccggatatccctcaccgtaccctgcaacacgacggagaaaccctg
ctgcaattgatccgccagacattgcagctgaatgctgatgcctggccagcgcggctcgat
ccgcccctggcgcagaaggaagggcccttgctgaaacgcctgaaaaaccatgtgcgcgaa
caggcagagcaattgaatttgccgccggaaattttgctgcgcaaaaaagaatacgaagcc
atcattcgctccggcatgaaaggcggtacctacgtgttgccagcacgcctgctcggctgg
cgccatggggtgatcggtgaaagtttattgcggctagcccaagagccgattgtgcccacc
agtgagccaaaccatgaaagtgatcagtga
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