Cellvibrio sp. PSBB006: CBR65_07760
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Entry
CBR65_07760 CDS
T04891
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cell
Cellvibrio sp. PSBB006
Pathway
cell03030
DNA replication
cell03430
Mismatch repair
cell03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cell00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBR65_07760
03430 Mismatch repair
CBR65_07760
03440 Homologous recombination
CBR65_07760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cell03032
]
CBR65_07760
03400 DNA repair and recombination proteins [BR:
cell03400
]
CBR65_07760
Enzymes [BR:
cell01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBR65_07760
DNA replication proteins [BR:
cell03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBR65_07760
DNA repair and recombination proteins [BR:
cell03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBR65_07760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ARU27342
UniProt:
A0A1Y0FV44
LinkDB
All DBs
Position
complement(1883079..1886579)
Genome browser
AA seq
1166 aa
AA seq
DB search
MTTNFVHLRLHTEFSLVDSLVRIKPLVKRVAELKMPACAVTDQTNFYGLIKFYKAAQGAG
IKPIVGSDFLMSSNDTEGKPTLLTLLAVDNTGYKNIIALISRAWQHGQQQGVAYVQREWI
SEHSEGVIALSGGKLGDVGMCLLAGRAAQAHELLQGWMRDFPNRFYLELQRTGRENDEEY
LHQAVALADEMQCPVVATNDVRFIKRDEFEVHEARVCISEGRTLDDPRRERRYSDQQYLR
SPEEMAELFSDIPEAIANTVEIAKRCNVSIQMGKYFLPEYPIPEGMTEAGFFRKISHEGL
EERLERILDKSAANYAERRKEYEDRLTFELDIIVQMGFPGYFLIVMDFIQWAKDHDIPVG
PGRGSGAGSLVAYSLKITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMDNRDKVISYVA
DNYGRDAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPPTPGMTLEAALEQES
ILREFLEMDGDAQEIWEMAKQLEGLTRNVGKHAGGVVIAPTKLTDFSPLFCDETGSGLVT
QFDKNDVEEAGLVKFDFLGLRTLTIIDWARLMIDKQRAKKGEPPLDINAIPLNDQKTFSL
LKRAETTAVFQLESRGMKDLIKRLQPDNIEDLIALVALFRPGPLESGMVDDFINRKHGRA
QVAYPDAKFQHASLKPVLEPTYGVIVYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEE
MAKQREVFEDGAKKQGVDPDLAIKIFDLVEKFAGYGFNKSHSAAYAIVSYQTAWLKAHYP
AHFMAATMSSDMDKTDKVVTFIEECRQMKLMPLPPDVNSGEFHFTVNDAGNIIYGLGAIK
GLGEGPVDSIIAARNEGGPFKNLFDFCARVDPRKVNKRALEALIRSGAADKLGPGINIDH
DRAVMFAAMNEAVKTAEQSAANSSAGMMDLFGDVVPSAASDEDVYRDFHRVRSWTMKERL
HAEKETLGLYLTGHPIDEYDSELNHLVSSRIADLKPEKSNQTVAGLVVAQRVMKTKRGDT
MAFVTLDDRTGRIEVAIFSDAYNQSRDLLMKDGLLVINGQVSYDDYNGLLKMRADTISLL
SDVRQEKARELCLELESGNLPANFIRELSSILDPYREGRCPLVIDYQRSNARAQLRLGNA
WLVRPEDDLLQRLRDQYGTAKVRLVY
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgactactaactttgtccatcttcgtctccataccgaattctcactggtcgacagtctg
gtgcgtatcaagcccttggtaaaacgtgtggctgaattgaagatgcctgcctgcgcggtt
accgatcaaaccaatttttacggcctcattaaattttacaaggcggcgcaaggcgccggt
atcaaaccgatagtgggcagtgatttcctgatgtcgagtaacgacactgaaggcaagcct
acattgttaaccttgttggcggtagacaataccggctataaaaatattattgcgttgatc
tcccgtgcctggcagcacggccaacagcagggcgttgcctatgtacagcgcgaatggatc
agtgaacacagtgaaggcgtaattgcgctctccggcggaaagttgggcgatgtcggtatg
tgtttgctggcggggcgtgcggcgcaagcgcacgaattgttgcagggttggatgcgcgat
ttccccaatcgtttttatcttgaattacagcgcaccggtcgggaaaacgatgaagaatat
ttgcatcaggccgttgcgctggcggatgaaatgcaatgcccggtggttgctactaacgat
gtgcgttttataaagcgtgatgaatttgaagttcatgaagcgcgggtatgtatcagcgaa
ggccgcaccctggatgacccgcgccgtgagcgccgctacagcgatcaacaatacctgcgt
tcgccggaagagatggcggagttgttcagtgatattcccgaagctatcgctaacaccgtt
gaaatcgccaagcgctgtaatgtatccattcaaatgggcaaatacttcctgcccgaatat
ccaattcctgagggaatgaccgaggcggggtttttccgcaagatttcccacgaggggtta
gaggaacggctcgaacgtatcctcgataaatcagcggcgaattatgctgagcgacgcaaa
gagtatgaagatcgtttgaccttcgagctcgacatcattgtgcagatgggttttcccggc
tatttccttatcgtgatggactttatccagtgggctaaagatcacgatattcccgttggg
ccggggcggggttccggtgcgggttctctcgtcgcttactcgctaaaaattaccgacctt
gatccgcttgaatacgatttgctgttcgaacgttttctcaacccggaacgggtttccatg
cccgacttcgatatcgacttctgcatggataaccgcgataaagtgatttcctacgtggcc
gataattacggtcgcgatgcggtcagccagatcattaccttcggtaccatggcggccaag
gcggtggtgcgtgatgtggcacgcgtgcaaggcaagtcatacgggcttgcagataaatta
tccaagatgattcccccgacgccgggcatgaccctggaagcggcgctggagcaagagtct
atcctgcgtgaatttttagagatggacggcgatgcccaggaaatctgggagatggccaag
caattggaaggcttgacgcgcaacgtcggtaagcacgccggtggtgtggtgatcgcgccc
accaaactcacggatttctcaccgctgttttgcgatgaaaccggtagcggcttggtaaca
caattcgataaaaatgatgtggaagaagcgggcctggtaaagttcgacttcctcggattg
cgcaccctgaccatcatcgattgggcgcgcctgatgatcgacaagcagcgtgccaaaaaa
ggcgagccgccgctggatatcaatgcaatcccactgaatgaccaaaaaacctttagcttg
ttaaagcgcgcagagacaaccgcggtattccagttggaatcgcgcggcatgaaagatctg
atcaagcgcttgcagccggataatattgaagacctgatcgcattggttgccttgtttcgc
ccaggtccgttggagtcgggcatggttgatgactttatcaaccggaaacacgggcgcgcg
caggttgcctatcccgatgcaaaatttcagcatgccagcttgaagccggtgcttgaaccg
acctacggcgttatcgtttatcaagaacaggttatgcaaattgcccaggtgcttgccgga
tacacgctcggcggtgcagacatgttgcgtcgcgctatgggtaagaaaaagcccgaggaa
atggccaagcagcgcgaagtatttgaggacggtgcaaaaaaacaaggcgtcgatcctgac
ctggcgatcaaaatctttgatctggtagaaaagtttgcgggctacggttttaacaaatcc
cactcggctgcttacgccattgtgtcttaccaaaccgcctggttgaaagcacattatccg
gcacactttatggccgcaaccatgtcatcggacatggataaaaccgacaaggtagtaacc
ttcatcgaagagtgccgtcagatgaagttgatgccgttgccgcccgatgtgaacagcggt
gaatttcatttcacggtgaatgacgcaggcaatattatctatggtttgggcgctatcaaa
ggcttgggtgagggaccggtagacagcattatcgccgcgcgcaatgaaggtgggccgttt
aaaaatttatttgatttctgcgcgcgtgttgatccacgaaaagtcaacaagcgcgcgctg
gaagcactgattcgttccggtgcagccgataagctcgggccgggtatcaatatcgatcat
gatcgcgcggtgatgtttgcagcgatgaatgaggcagtgaaaacggctgaacaatctgcc
gcgaacagcagcgccgggatgatggatttattcggcgatgtagtgcccagtgccgcttct
gatgaagacgtataccgcgattttcatcgcgtgcgcagttggaccatgaaagagcgcctg
cacgcggaaaaagaaactcttggcttgtatctcactggtcaccccatcgacgaatacgac
agtgaattgaaccatctggtgtcatcgcgcattgcggatttgaaaccggagaaaagtaac
cagaccgttgcgggcctggttgttgcgcaacgtgtaatgaaaaccaagcgcggcgacacc
atggcttttgtaaccctggatgatcgtaccggacgcattgaagtggcaatcttttcggat
gcctacaatcagtcccgcgatttgttgatgaaagatggcttgctggtgatcaacggccag
gtgagttacgacgattacaacggcttactgaagatgcgtgctgacaccatcagcctgttg
tccgatgtgcgtcaggaaaaggcgcgggaactatgcctggagctggaatcaggtaatttg
ccggcaaactttatccgtgagttgagcagtattcttgatccttaccgtgaagggcgctgc
cccctggttatcgactaccagcgcagcaacgcacgagcgcagcttcgtctcggcaacgcc
tggctggtccgaccggaggatgatttgttacaacgcctgcgtgaccagtatggaacagcc
aaggtgcggctggtttattag
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integrated database retrieval system
