Cellvibrio sp. PSBB006: CBR65_09135
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Entry
CBR65_09135 CDS
T04891
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cell
Cellvibrio sp. PSBB006
Pathway
cell03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cell00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBR65_09135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cell03021
]
CBR65_09135
03400 DNA repair and recombination proteins [BR:
cell03400
]
CBR65_09135
Enzymes [BR:
cell01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBR65_09135
Transcription machinery [BR:
cell03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBR65_09135
DNA repair and recombination proteins [BR:
cell03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBR65_09135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
ARU27588
LinkDB
All DBs
Position
complement(2206374..2210459)
Genome browser
AA seq
1361 aa
AA seq
DB search
MAYSYTEKKRIRKDFGKLPHVMDVPYLLAIQLDSYRKFTQADQSPSKREDVGLHAAFRSV
FPIVSYSGNAALEYVSYNLGKAAFDVNECILRGVTYAVPLRVKVRLIIYDRESANKAIKD
IKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKLLYSARI
IPYRGSWLDFEFDPKDLLYVRIDRRRKLPASILLRALGFSSQEMLEMFFETSNFKVDKNG
QFVFEVVPSRLRGDVATFDIKDKKGNIIIEEGRRITARHIRLLEKAGVDQMEVPSEYLLG
RSLAKDVVDTKTGEVLFECNTEITADTLAKLAAAGVEKIETLYTNELDCGPFVSETLRID
PTRTQLEALVEIYRMMRPGEPPTKESAEALFQNLFFSQERYDLSAVGRMKFNRRLGREIE
TGEGTLSNDDIVDVMKTLISIRNGKGVVDDIDHLGNRRVRSVGEMAENQFRVGLVRVERA
VKERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLATYARTNSYGFLESPYRKV
VDGKVTNDIEFLSAINEAEYVIAQASAAVDKNGKLSDELVSVRHLNEFALKPPQDVQYMD
VSARQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLKAEKPLVGTGMERNVAADSGV
CVVAKRGGVVDSVDAGRVVIKVHDDEVAAGDAGVDIYNLIKYTRSNQNTCINQRPIVNMG
DIVARGDILADGPSVDMGELALGQNMRIAFMPWNGYNYEDSILVSERVVQEDRFTTIHIQ
ELTCIARDTKLGSEEITADIPNVGESALSKLDESGIVYIGAEVGGGDILVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSSTKGTVIDVQVFTRDGLEKDQRSLEIEKAQLD
EVRKDLNEEYRIMETATLERLRAALVGQKVASGKGVKKGDALTDEMLDGLEKDQWFKLRM
ADEVLNEQIDRAEEQLAERRKILDERFEDKKRKLSTGDDLAPGVLKIVKVYLAIKRRIQP
GDKMAGRHGNKGVISVIMPVEDMPHDEKGEPVDIVLNPLGVPSRMNVGQVLEMHLGMAAK
GLGVKIDAMLREQRAVAEVRSFLEEIYNKTGDVAAKEDLASFSDTEILDLARNLIGGVPM
ATPVFDGAKEHEIKALLRLADLSDTGQTTLFDGRTGDQFSRPVTVGYMYMLKLNHLVDDK
MHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRT
KMYKNIVDGDHRMEPGMPESFNVLVKEIRSLGINMELEQDE
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcatacactgagaaaaaacgtatccgcaaggattttggcaagttgccacac
gtcatggatgtgccttaccttttggcgattcaactggattcatatcggaaatttacccag
gcagatcagtctcccagcaagcgggaagatgttggtttgcatgcggcattccggtcagtg
ttcccgattgtcagctactctggcaatgctgcgctcgaatatgtgagctataacctcggc
aaagcagcgtttgacgtaaatgaatgtattttgcgcggcgttacctacgccgtgcctttg
cgcgttaaagtgcgcctgatcatttatgatcgtgaatccgcgaataaagcgatcaaagat
attaaagagcaagaagtgtacatgggcgaaattccgctcatgacagacaatggtacattt
gttatcaatggtaccgagcgagtcatcgtttcgcagttgcaccgttcgcctggcgtgttc
tttgaccacgataaaggcaagacccactcttccggtaaattactttattccgcacggatt
attccttaccgtggatcatggctcgattttgaattcgatccaaaagatttgttatacgtc
cgtatcgaccgtcgacgtaaattgcccgcctctatccttttgcgtgctttaggttttagc
tcgcaggaaatgctggagatgtttttcgaaaccagcaatttcaaagttgataagaatggt
caatttgtatttgaggtggtgccgtctcgcctgcgtggtgatgtggcaacatttgatatc
aaagacaagaaaggcaatatcattatcgaagaaggccgtcgtattacggcgcgtcatatt
cgtttgcttgaaaaagctggtgttgatcagatggaagttccgtcagaatatctgttggga
cgctcgttggcgaaagatgttgttgataccaaaaccggtgaagtgttatttgaatgtaat
actgaaatcaccgctgatactctcgccaagctcgccgcagctggcgtagaaaaaattgaa
acactctacaccaacgaactggattgtggtccattcgtatcggaaaccttgcgtatcgat
ccaactcgtacccagctggaagcgttggttgaaatctaccgcatgatgcgccctggcgag
ccaccgaccaaagaatccgcagaagcgttgttccagaatctgttcttcagtcaggagcgc
tacgacttatccgctgtgggtcgcatgaagttcaaccgccgtctcggtcgtgagattgag
acaggcgaaggcaccttgtccaacgatgatatcgttgatgtgatgaagacattgatctcc
atccgtaacggtaaaggtgttgtggatgatattgatcacttgggtaaccgtcgcgtgcgt
tctgttggcgagatggcggagaatcaattccgcgttggtctggtgcgtgttgagcgtgcg
gttaaagagcgcttatccatggcagaaagcgaaggtttgatgccgcaagatctgatcaat
gccaagcccgttgcagcggcagtgaaagagttcttcggttcttcccagttgtcgcaattc
atggaccaaaacaatcccttgtcggaagtgacgcacaagcgtcgtgtgtccgcgctcggc
ccgggtggtttgacgcgcgaacgtgccggctttgaggttcgtgacgtgcatccgacgcat
tatggtcgtgtttgcccaattgaaactcccgaaggtccgaacatcggtttgataaactcc
ttggctacctacgctcgtaccaacagctatggctttctcgaaagtccgtaccgcaaagtt
gtcgatggcaaggttaccaatgacattgaatttttgtccgcgattaacgaagccgaatat
gttattgcccaggcttcggcagcggtagacaaaaatggcaaactctctgatgagctggtt
tctgtgcgtcacttgaatgagttcgcattgaagccgccacaagatgttcagtacatggac
gtctcggcgcgtcaggttgtttctgttgcggcctccttgattccattccttgagcacgat
gacgccaaccgcgccttgatgggttccaacatgcagcgtcaggcagttccgacactcaag
gcggaaaaaccgctggttggtactggtatggagcgcaacgtagcagctgactctggcgtg
tgtgttgtcgcaaaacgtggcggcgtggtggacagtgttgacgcaggtcgtgtggtgatc
aaggttcatgatgatgaagttgctgccggtgatgccggtgtggatatctataacctgatc
aagtacacccgttctaaccagaacacctgtatcaatcagcgtcctatcgtcaatatgggc
gacatcgttgcacgcggcgatatccttgcggacggcccgtctgttgacatgggcgaattg
gcgttgggccagaacatgcgcatcgcgtttatgccctggaacggatacaactatgaagac
tccattctggtatccgaacgtgttgtgcaggaagaccgtttcactacgatccatattcag
gaattaacctgtattgcacgcgacaccaaattgggcagcgaagaaatcaccgcagatatt
cccaatgtcggcgaaagtgcactgagcaagctggatgagtccggcattgtttacattggt
gcggaagtcggtggtggcgatattctggttggtaaagtgacgcctaaaggcgaaacacag
ctgacgcctgaagaaaaactgttgcgtgcaatctttggtgagaaggcttccgatgttaaa
gatacatcgttgcgtgtaccgtcaagcaccaaaggtaccgtcattgatgtgcaggtattt
actcgcgatggtctggaaaaagatcaacgtagccttgagatcgaaaaagcacagctggat
gaagtgcgtaaagacctcaacgaagaataccgcattatggaaaccgctacacttgagcgt
ttgcgcgccgcgctggtgggccaaaaagtcgcttccggtaaaggtgttaaaaaaggcgat
gccttgactgacgagatgctggatggtctggaaaaagaccaatggttcaagctgcgcatg
gccgacgaagtgctcaatgagcagattgatcgtgcggaagagcagttggccgagcgtcgt
aaaatccttgatgaacgttttgaagacaagaagcgcaaattgtctacgggcgatgatctg
gcgccgggtgtattgaaaattgttaaggtgtatctggcgatcaagcgccgcatccaaccc
ggtgacaagatggcaggtcgtcacggtaacaaaggggttatctccgtcatcatgcccgtt
gaagacatgccgcatgatgagaagggtgagccagttgacatcgtgctgaacccgctgggt
gttccctctcgtatgaacgtggggcaggtgctggaaatgcacttgggtatggctgccaaa
ggtctgggtgtgaagattgatgcaatgttgcgtgagcagcgtgctgttgcagaagttcgc
agcttccttgaagagatttacaacaagaccggtgacgtagcggcaaaagaagatttggca
tcattcagtgatactgaaattctggatcttgcgcgcaatttgattggtggcgtaccgatg
gcaacgcctgtttttgacggtgccaaagagcatgagatcaaggcattgttgcgtttggct
gacttgtccgataccggtcaaaccactttgtttgacggccgtaccggtgatcagttttca
cgtcctgtgactgtgggttacatgtacatgctgaaactgaaccacttggttgacgacaag
atgcacgcacgttctaccggttcctacagtctggttacccaacagccgctcggtggtaaa
gcacagtttggcggtcagcgtttcggggagatggaagtgtgggcgcttgaagcttatggc
gcggcctacacccttcaggaaatgcttactgtcaaatccgacgatgtggctggtcgtacc
aagatgtacaaaaacatcgtggatggcgatcaccgtatggagcccggcatgccggaatcc
tttaacgtattggttaaagagatccgctcgctcggtatcaacatggaactggagcaggac
gagtaa
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